Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC18.32■□□□□ 0.52
SYNPO2Q9UMS6 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SYNPO2Q9UMS6 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC18.32■□□□□ 0.52
SYNPO2Q9UMS6 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SYNPO2Q9UMS6 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
SYNPO2Q9UMS6 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SYNPO2Q9UMS6 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SYNPO2Q9UMS6 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SYNPO2Q9UMS6 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
SYNPO2Q9UMS6 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SYNPO2Q9UMS6 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SYNPO2Q9UMS6 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SYNPO2Q9UMS6 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SYNPO2Q9UMS6 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SYNPO2Q9UMS6 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SYNPO2Q9UMS6 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
SYNPO2Q9UMS6 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SYNPO2Q9UMS6 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SYNPO2Q9UMS6 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SYNPO2Q9UMS6 SUN1-204ENST00000403868 978 ntTSL 2 BASIC18.31■□□□□ 0.52
SYNPO2Q9UMS6 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC18.31■□□□□ 0.52
SYNPO2Q9UMS6 ACTG1P3-201ENST00000431775 1114 ntBASIC18.31■□□□□ 0.52
SYNPO2Q9UMS6 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC18.31■□□□□ 0.52
SYNPO2Q9UMS6 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC18.31■□□□□ 0.52
SYNPO2Q9UMS6 HNRNPA1P13-201ENST00000510646 963 ntBASIC18.31■□□□□ 0.52
SYNPO2Q9UMS6 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC18.31■□□□□ 0.52
SYNPO2Q9UMS6 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC18.31■□□□□ 0.52
SYNPO2Q9UMS6 AL049840.4-201ENST00000602422 811 ntBASIC18.31■□□□□ 0.52
SYNPO2Q9UMS6 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC18.31■□□□□ 0.52
SYNPO2Q9UMS6 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC18.31■□□□□ 0.52
SYNPO2Q9UMS6 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SYNPO2Q9UMS6 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SYNPO2Q9UMS6 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
SYNPO2Q9UMS6 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SYNPO2Q9UMS6 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SYNPO2Q9UMS6 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC18.31■□□□□ 0.52
SYNPO2Q9UMS6 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SYNPO2Q9UMS6 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SYNPO2Q9UMS6 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC18.31■□□□□ 0.52
SYNPO2Q9UMS6 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SYNPO2Q9UMS6 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SYNPO2Q9UMS6 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SYNPO2Q9UMS6 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SYNPO2Q9UMS6 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
SYNPO2Q9UMS6 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SYNPO2Q9UMS6 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC18.3■□□□□ 0.52
SYNPO2Q9UMS6 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SYNPO2Q9UMS6 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
SYNPO2Q9UMS6 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SYNPO2Q9UMS6 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SYNPO2Q9UMS6 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.3■□□□□ 0.52
SYNPO2Q9UMS6 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SYNPO2Q9UMS6 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SYNPO2Q9UMS6 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SYNPO2Q9UMS6 APOA1-205ENST00000375329 927 ntTSL 2 BASIC18.3■□□□□ 0.52
SYNPO2Q9UMS6 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SYNPO2Q9UMS6 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
SYNPO2Q9UMS6 SOCS2P1-201ENST00000417727 557 ntBASIC18.3■□□□□ 0.52
SYNPO2Q9UMS6 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC18.3■□□□□ 0.52
SYNPO2Q9UMS6 AC026410.3-201ENST00000514280 936 ntBASIC18.3■□□□□ 0.52
SYNPO2Q9UMS6 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC18.3■□□□□ 0.52
SYNPO2Q9UMS6 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC18.3■□□□□ 0.52
SYNPO2Q9UMS6 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC18.3■□□□□ 0.52
SYNPO2Q9UMS6 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC18.3■□□□□ 0.52
SYNPO2Q9UMS6 AC120045.2-201ENST00000567334 178 ntBASIC18.3■□□□□ 0.52
SYNPO2Q9UMS6 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC18.3■□□□□ 0.52
SYNPO2Q9UMS6 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SYNPO2Q9UMS6 AC010319.3-201ENST00000597028 470 ntBASIC18.3■□□□□ 0.52
SYNPO2Q9UMS6 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
SYNPO2Q9UMS6 AC018892.3-201ENST00000623986 2499 ntBASIC18.3■□□□□ 0.52
SYNPO2Q9UMS6 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SYNPO2Q9UMS6 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SYNPO2Q9UMS6 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC18.3■□□□□ 0.52
SYNPO2Q9UMS6 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SYNPO2Q9UMS6 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
SYNPO2Q9UMS6 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC18.3■□□□□ 0.52
SYNPO2Q9UMS6 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.29■□□□□ 0.52
SYNPO2Q9UMS6 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SYNPO2Q9UMS6 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SYNPO2Q9UMS6 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
SYNPO2Q9UMS6 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SYNPO2Q9UMS6 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SYNPO2Q9UMS6 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SYNPO2Q9UMS6 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SYNPO2Q9UMS6 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC18.29■□□□□ 0.52
SYNPO2Q9UMS6 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SYNPO2Q9UMS6 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
SYNPO2Q9UMS6 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
SYNPO2Q9UMS6 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SYNPO2Q9UMS6 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC18.29■□□□□ 0.52
SYNPO2Q9UMS6 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SYNPO2Q9UMS6 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC18.29■□□□□ 0.52
SYNPO2Q9UMS6 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC18.29■□□□□ 0.52
SYNPO2Q9UMS6 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SYNPO2Q9UMS6 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SYNPO2Q9UMS6 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC18.29■□□□□ 0.52
SYNPO2Q9UMS6 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SYNPO2Q9UMS6 AL359711.2-201ENST00000563105 872 ntBASIC18.29■□□□□ 0.52
SYNPO2Q9UMS6 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SYNPO2Q9UMS6 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms