Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HMG20BQ9P0W2 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMG20BQ9P0W2 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMG20BQ9P0W2 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
HMG20BQ9P0W2 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC19.51■□□□□ 0.71
HMG20BQ9P0W2 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
HMG20BQ9P0W2 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HMG20BQ9P0W2 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
HMG20BQ9P0W2 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
HMG20BQ9P0W2 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
HMG20BQ9P0W2 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMG20BQ9P0W2 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HMG20BQ9P0W2 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HMG20BQ9P0W2 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMG20BQ9P0W2 AC024909.3-201ENST00000611513 2257 ntBASIC19.5■□□□□ 0.71
HMG20BQ9P0W2 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC19.5■□□□□ 0.71
HMG20BQ9P0W2 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
HMG20BQ9P0W2 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMG20BQ9P0W2 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMG20BQ9P0W2 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC19.5■□□□□ 0.71
HMG20BQ9P0W2 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
HMG20BQ9P0W2 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
HMG20BQ9P0W2 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
HMG20BQ9P0W2 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC19.5■□□□□ 0.71
HMG20BQ9P0W2 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
HMG20BQ9P0W2 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMG20BQ9P0W2 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC19.5■□□□□ 0.71
HMG20BQ9P0W2 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC19.5■□□□□ 0.71
HMG20BQ9P0W2 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC19.5■□□□□ 0.71
HMG20BQ9P0W2 SDHAP3-202ENST00000515467 728 ntBASIC19.5■□□□□ 0.71
HMG20BQ9P0W2 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC19.5■□□□□ 0.71
HMG20BQ9P0W2 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC19.5■□□□□ 0.71
HMG20BQ9P0W2 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC19.5■□□□□ 0.71
HMG20BQ9P0W2 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HMG20BQ9P0W2 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMG20BQ9P0W2 AC190387.1-201ENST00000551683 408 ntBASIC19.5■□□□□ 0.71
HMG20BQ9P0W2 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC19.5■□□□□ 0.71
HMG20BQ9P0W2 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC19.5■□□□□ 0.71
HMG20BQ9P0W2 AC243562.2-201ENST00000561247 970 ntBASIC19.5■□□□□ 0.71
HMG20BQ9P0W2 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC19.5■□□□□ 0.71
HMG20BQ9P0W2 AC025048.3-201ENST00000590609 569 ntBASIC19.5■□□□□ 0.71
HMG20BQ9P0W2 AC005702.4-201ENST00000618393 416 ntBASIC19.5■□□□□ 0.71
HMG20BQ9P0W2 AC004461.2-201ENST00000629517 803 ntBASIC19.5■□□□□ 0.71
HMG20BQ9P0W2 AF228730.6-201ENST00000641497 218 ntBASIC19.5■□□□□ 0.71
HMG20BQ9P0W2 AC084121.3-201ENST00000641716 218 ntBASIC19.5■□□□□ 0.71
HMG20BQ9P0W2 AC105233.6-201ENST00000642093 218 ntBASIC19.5■□□□□ 0.71
HMG20BQ9P0W2 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC19.5■□□□□ 0.71
HMG20BQ9P0W2 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HMG20BQ9P0W2 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC19.5■□□□□ 0.71
HMG20BQ9P0W2 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC19.5■□□□□ 0.71
HMG20BQ9P0W2 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC19.5■□□□□ 0.71
HMG20BQ9P0W2 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMG20BQ9P0W2 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMG20BQ9P0W2 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC19.5■□□□□ 0.71
HMG20BQ9P0W2 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMG20BQ9P0W2 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMG20BQ9P0W2 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC19.5■□□□□ 0.71
HMG20BQ9P0W2 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
HMG20BQ9P0W2 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
HMG20BQ9P0W2 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC19.49■□□□□ 0.71
HMG20BQ9P0W2 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HMG20BQ9P0W2 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
HMG20BQ9P0W2 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC19.49■□□□□ 0.71
HMG20BQ9P0W2 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
HMG20BQ9P0W2 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
HMG20BQ9P0W2 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
HMG20BQ9P0W2 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HMG20BQ9P0W2 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
HMG20BQ9P0W2 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
HMG20BQ9P0W2 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
HMG20BQ9P0W2 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC19.49■□□□□ 0.71
HMG20BQ9P0W2 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HMG20BQ9P0W2 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
HMG20BQ9P0W2 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HMG20BQ9P0W2 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HMG20BQ9P0W2 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
HMG20BQ9P0W2 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HMG20BQ9P0W2 CALY-202ENST00000368555 783 ntTSL 2 BASIC19.49■□□□□ 0.71
HMG20BQ9P0W2 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
HMG20BQ9P0W2 AZGP1P1-201ENST00000411909 902 ntBASIC19.49■□□□□ 0.71
HMG20BQ9P0W2 PIN1P1-201ENST00000412108 996 ntBASIC19.49■□□□□ 0.71
HMG20BQ9P0W2 PNKD-204ENST00000436005 978 ntTSL 5 BASIC19.49■□□□□ 0.71
HMG20BQ9P0W2 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC19.49■□□□□ 0.71
HMG20BQ9P0W2 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC19.49■□□□□ 0.71
HMG20BQ9P0W2 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC19.49■□□□□ 0.71
HMG20BQ9P0W2 FXR1-221ENST00000491674 365 ntTSL 2 BASIC19.49■□□□□ 0.71
HMG20BQ9P0W2 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC19.49■□□□□ 0.71
HMG20BQ9P0W2 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC19.49■□□□□ 0.71
HMG20BQ9P0W2 SPDYE22P-201ENST00000582158 798 ntBASIC19.49■□□□□ 0.71
HMG20BQ9P0W2 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HMG20BQ9P0W2 AC004233.3-201ENST00000607794 1269 ntBASIC19.49■□□□□ 0.71
HMG20BQ9P0W2 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC19.49■□□□□ 0.71
HMG20BQ9P0W2 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HMG20BQ9P0W2 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HMG20BQ9P0W2 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC19.49■□□□□ 0.71
HMG20BQ9P0W2 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC19.49■□□□□ 0.71
HMG20BQ9P0W2 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
HMG20BQ9P0W2 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
HMG20BQ9P0W2 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
HMG20BQ9P0W2 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms