Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
HCFC1R1Q9NWW0 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16.56■□□□□ 0.24
HCFC1R1Q9NWW0 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HCFC1R1Q9NWW0 AC134915.1-201ENST00000426461 574 ntBASIC16.56■□□□□ 0.24
HCFC1R1Q9NWW0 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.56■□□□□ 0.24
HCFC1R1Q9NWW0 KLF2P4-201ENST00000451959 1225 ntBASIC16.56■□□□□ 0.24
HCFC1R1Q9NWW0 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.56■□□□□ 0.24
HCFC1R1Q9NWW0 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16.56■□□□□ 0.24
HCFC1R1Q9NWW0 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.56■□□□□ 0.24
HCFC1R1Q9NWW0 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC16.56■□□□□ 0.24
HCFC1R1Q9NWW0 MIR4538-201ENST00000581377 78 ntBASIC16.56■□□□□ 0.24
HCFC1R1Q9NWW0 AL049840.4-201ENST00000602422 811 ntBASIC16.56■□□□□ 0.24
HCFC1R1Q9NWW0 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.56■□□□□ 0.24
HCFC1R1Q9NWW0 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HCFC1R1Q9NWW0 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.56■□□□□ 0.24
HCFC1R1Q9NWW0 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HCFC1R1Q9NWW0 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.56■□□□□ 0.24
HCFC1R1Q9NWW0 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.56■□□□□ 0.24
HCFC1R1Q9NWW0 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HCFC1R1Q9NWW0 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HCFC1R1Q9NWW0 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HCFC1R1Q9NWW0 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HCFC1R1Q9NWW0 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
HCFC1R1Q9NWW0 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
HCFC1R1Q9NWW0 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HCFC1R1Q9NWW0 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
HCFC1R1Q9NWW0 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.55■□□□□ 0.24
HCFC1R1Q9NWW0 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HCFC1R1Q9NWW0 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HCFC1R1Q9NWW0 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.55■□□□□ 0.24
HCFC1R1Q9NWW0 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HCFC1R1Q9NWW0 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HCFC1R1Q9NWW0 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.55■□□□□ 0.24
HCFC1R1Q9NWW0 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
HCFC1R1Q9NWW0 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
HCFC1R1Q9NWW0 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16.55■□□□□ 0.24
HCFC1R1Q9NWW0 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.55■□□□□ 0.24
HCFC1R1Q9NWW0 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.55■□□□□ 0.24
HCFC1R1Q9NWW0 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.55■□□□□ 0.24
HCFC1R1Q9NWW0 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.55■□□□□ 0.24
HCFC1R1Q9NWW0 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
HCFC1R1Q9NWW0 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.55■□□□□ 0.24
HCFC1R1Q9NWW0 VDAC1P7-201ENST00000462417 847 ntBASIC16.55■□□□□ 0.24
HCFC1R1Q9NWW0 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
HCFC1R1Q9NWW0 SLED1-202ENST00000512051 380 ntBASIC16.55■□□□□ 0.24
HCFC1R1Q9NWW0 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC16.55■□□□□ 0.24
HCFC1R1Q9NWW0 PACS1-203ENST00000524815 628 ntTSL 4 BASIC16.55■□□□□ 0.24
HCFC1R1Q9NWW0 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.55■□□□□ 0.24
HCFC1R1Q9NWW0 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.55■□□□□ 0.24
HCFC1R1Q9NWW0 HNRNPUP1-201ENST00000554987 333 ntBASIC16.55■□□□□ 0.24
HCFC1R1Q9NWW0 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC16.55■□□□□ 0.24
HCFC1R1Q9NWW0 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HCFC1R1Q9NWW0 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
HCFC1R1Q9NWW0 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HCFC1R1Q9NWW0 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
HCFC1R1Q9NWW0 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HCFC1R1Q9NWW0 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HCFC1R1Q9NWW0 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HCFC1R1Q9NWW0 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.55■□□□□ 0.24
HCFC1R1Q9NWW0 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.55■□□□□ 0.24
HCFC1R1Q9NWW0 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HCFC1R1Q9NWW0 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HCFC1R1Q9NWW0 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.55■□□□□ 0.24
HCFC1R1Q9NWW0 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.55■□□□□ 0.24
HCFC1R1Q9NWW0 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.55■□□□□ 0.24
HCFC1R1Q9NWW0 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HCFC1R1Q9NWW0 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HCFC1R1Q9NWW0 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.54■□□□□ 0.24
HCFC1R1Q9NWW0 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HCFC1R1Q9NWW0 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
HCFC1R1Q9NWW0 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HCFC1R1Q9NWW0 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
HCFC1R1Q9NWW0 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16.54■□□□□ 0.24
HCFC1R1Q9NWW0 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC16.54■□□□□ 0.24
HCFC1R1Q9NWW0 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
HCFC1R1Q9NWW0 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
HCFC1R1Q9NWW0 MSTO2P-201ENST00000314835 1709 ntBASIC16.54■□□□□ 0.24
HCFC1R1Q9NWW0 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HCFC1R1Q9NWW0 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HCFC1R1Q9NWW0 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
HCFC1R1Q9NWW0 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HCFC1R1Q9NWW0 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
HCFC1R1Q9NWW0 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HCFC1R1Q9NWW0 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HCFC1R1Q9NWW0 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
HCFC1R1Q9NWW0 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
HCFC1R1Q9NWW0 HAUS4P1-201ENST00000406739 1145 ntBASIC16.54■□□□□ 0.24
HCFC1R1Q9NWW0 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.54■□□□□ 0.24
HCFC1R1Q9NWW0 AC099336.1-201ENST00000417053 1171 ntBASIC16.54■□□□□ 0.24
HCFC1R1Q9NWW0 USB1-202ENST00000423271 1217 ntTSL 2 BASIC16.54■□□□□ 0.24
HCFC1R1Q9NWW0 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HCFC1R1Q9NWW0 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HCFC1R1Q9NWW0 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC16.54■□□□□ 0.24
HCFC1R1Q9NWW0 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.54■□□□□ 0.24
HCFC1R1Q9NWW0 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
HCFC1R1Q9NWW0 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HCFC1R1Q9NWW0 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC16.54■□□□□ 0.24
HCFC1R1Q9NWW0 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
HCFC1R1Q9NWW0 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HCFC1R1Q9NWW0 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms