Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 CENPM-204ENST00000402420 688 ntTSL 5 BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 AC018712.1-201ENST00000455767 687 ntBASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 MIR4751-201ENST00000578027 74 ntBASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 MIR4321-201ENST00000592276 80 ntBASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 PCDHA3-202ENST00000532566 4594 ntBASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 AC138035.3-201ENST00000622706 2791 ntBASIC11.11□□□□□ -0.63
CDC42SE2Q9NRR3 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC11.1□□□□□ -0.63
CDC42SE2Q9NRR3 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CDC42SE2Q9NRR3 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CDC42SE2Q9NRR3 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC11.1□□□□□ -0.63
CDC42SE2Q9NRR3 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
CDC42SE2Q9NRR3 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CDC42SE2Q9NRR3 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC11.1□□□□□ -0.63
CDC42SE2Q9NRR3 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CDC42SE2Q9NRR3 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
CDC42SE2Q9NRR3 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC11.1□□□□□ -0.63
CDC42SE2Q9NRR3 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CDC42SE2Q9NRR3 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC11.1□□□□□ -0.63
CDC42SE2Q9NRR3 AC105250.1-201ENST00000509378 2057 ntBASIC11.1□□□□□ -0.63
CDC42SE2Q9NRR3 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
CDC42SE2Q9NRR3 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
CDC42SE2Q9NRR3 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CDC42SE2Q9NRR3 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CDC42SE2Q9NRR3 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CDC42SE2Q9NRR3 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
CDC42SE2Q9NRR3 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC11.1□□□□□ -0.63
CDC42SE2Q9NRR3 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
CDC42SE2Q9NRR3 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CDC42SE2Q9NRR3 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CDC42SE2Q9NRR3 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CDC42SE2Q9NRR3 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC11.1□□□□□ -0.63
CDC42SE2Q9NRR3 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC11.1□□□□□ -0.63
CDC42SE2Q9NRR3 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CDC42SE2Q9NRR3 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CDC42SE2Q9NRR3 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CDC42SE2Q9NRR3 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
CDC42SE2Q9NRR3 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
CDC42SE2Q9NRR3 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CDC42SE2Q9NRR3 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC11.1□□□□□ -0.63
CDC42SE2Q9NRR3 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CDC42SE2Q9NRR3 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
CDC42SE2Q9NRR3 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC11.1□□□□□ -0.63
CDC42SE2Q9NRR3 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
CDC42SE2Q9NRR3 AC092474.2-201ENST00000424288 719 ntBASIC11.1□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms