Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
PCDHB16Q9NRJ7 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCDHB16Q9NRJ7 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCDHB16Q9NRJ7 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCDHB16Q9NRJ7 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCDHB16Q9NRJ7 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCDHB16Q9NRJ7 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCDHB16Q9NRJ7 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PCDHB16Q9NRJ7 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PCDHB16Q9NRJ7 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
PCDHB16Q9NRJ7 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
PCDHB16Q9NRJ7 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PCDHB16Q9NRJ7 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
PCDHB16Q9NRJ7 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PCDHB16Q9NRJ7 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
PCDHB16Q9NRJ7 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCDHB16Q9NRJ7 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCDHB16Q9NRJ7 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
PCDHB16Q9NRJ7 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PCDHB16Q9NRJ7 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.09□□□□□ -0.15
PCDHB16Q9NRJ7 DUSP5P1-201ENST00000441325 1139 ntBASIC14.09□□□□□ -0.15
PCDHB16Q9NRJ7 TOLLIP-AS1-201ENST00000530897 939 ntBASIC14.09□□□□□ -0.15
PCDHB16Q9NRJ7 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PCDHB16Q9NRJ7 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.09□□□□□ -0.15
PCDHB16Q9NRJ7 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.09□□□□□ -0.15
PCDHB16Q9NRJ7 AC021087.4-201ENST00000563761 564 ntBASIC14.09□□□□□ -0.15
PCDHB16Q9NRJ7 AC008667.4-201ENST00000607370 168 ntBASIC14.09□□□□□ -0.15
PCDHB16Q9NRJ7 AC021097.1-201ENST00000607902 574 ntBASIC14.09□□□□□ -0.15
PCDHB16Q9NRJ7 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.09□□□□□ -0.15
PCDHB16Q9NRJ7 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCDHB16Q9NRJ7 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
PCDHB16Q9NRJ7 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCDHB16Q9NRJ7 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
PCDHB16Q9NRJ7 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.09□□□□□ -0.15
PCDHB16Q9NRJ7 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCDHB16Q9NRJ7 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PCDHB16Q9NRJ7 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.09□□□□□ -0.15
PCDHB16Q9NRJ7 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
PCDHB16Q9NRJ7 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
PCDHB16Q9NRJ7 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.09□□□□□ -0.15
PCDHB16Q9NRJ7 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC14.09□□□□□ -0.15
PCDHB16Q9NRJ7 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCDHB16Q9NRJ7 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PCDHB16Q9NRJ7 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
PCDHB16Q9NRJ7 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
PCDHB16Q9NRJ7 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCDHB16Q9NRJ7 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCDHB16Q9NRJ7 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
PCDHB16Q9NRJ7 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCDHB16Q9NRJ7 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.09□□□□□ -0.15
PCDHB16Q9NRJ7 AC026748.1-201ENST00000624349 3251 ntBASIC14.09□□□□□ -0.15
PCDHB16Q9NRJ7 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCDHB16Q9NRJ7 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCDHB16Q9NRJ7 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PCDHB16Q9NRJ7 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
PCDHB16Q9NRJ7 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
PCDHB16Q9NRJ7 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
PCDHB16Q9NRJ7 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
PCDHB16Q9NRJ7 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
PCDHB16Q9NRJ7 AC139749.1-202ENST00000617529 3139 ntBASIC14.08□□□□□ -0.15
PCDHB16Q9NRJ7 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
PCDHB16Q9NRJ7 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
PCDHB16Q9NRJ7 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
PCDHB16Q9NRJ7 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.08□□□□□ -0.15
PCDHB16Q9NRJ7 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
PCDHB16Q9NRJ7 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.08□□□□□ -0.15
PCDHB16Q9NRJ7 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
PCDHB16Q9NRJ7 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
PCDHB16Q9NRJ7 U82695.1-201ENST00000635752 1889 ntBASIC14.08□□□□□ -0.16
PCDHB16Q9NRJ7 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCDHB16Q9NRJ7 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCDHB16Q9NRJ7 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCDHB16Q9NRJ7 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
PCDHB16Q9NRJ7 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.08□□□□□ -0.16
PCDHB16Q9NRJ7 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCDHB16Q9NRJ7 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
PCDHB16Q9NRJ7 AC015656.1-201ENST00000624209 3578 ntBASIC14.08□□□□□ -0.16
PCDHB16Q9NRJ7 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PCDHB16Q9NRJ7 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.08□□□□□ -0.16
PCDHB16Q9NRJ7 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PCDHB16Q9NRJ7 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.08□□□□□ -0.16
PCDHB16Q9NRJ7 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCDHB16Q9NRJ7 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC14.08□□□□□ -0.16
PCDHB16Q9NRJ7 AC107918.2-201ENST00000530817 355 ntBASIC14.08□□□□□ -0.16
PCDHB16Q9NRJ7 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC14.08□□□□□ -0.16
PCDHB16Q9NRJ7 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.08□□□□□ -0.16
PCDHB16Q9NRJ7 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.08□□□□□ -0.16
PCDHB16Q9NRJ7 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.08□□□□□ -0.16
PCDHB16Q9NRJ7 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PCDHB16Q9NRJ7 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.08□□□□□ -0.16
PCDHB16Q9NRJ7 AC012313.10-201ENST00000623509 926 ntBASIC14.08□□□□□ -0.16
PCDHB16Q9NRJ7 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
PCDHB16Q9NRJ7 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
PCDHB16Q9NRJ7 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.08□□□□□ -0.16
PCDHB16Q9NRJ7 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.08□□□□□ -0.16
PCDHB16Q9NRJ7 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCDHB16Q9NRJ7 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PCDHB16Q9NRJ7 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.08□□□□□ -0.16
PCDHB16Q9NRJ7 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PCDHB16Q9NRJ7 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms