Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC68Q9H2F9 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CCDC68Q9H2F9 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CCDC68Q9H2F9 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC68Q9H2F9 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC68Q9H2F9 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC68Q9H2F9 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CCDC68Q9H2F9 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC68Q9H2F9 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC68Q9H2F9 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC68Q9H2F9 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.21■□□□□ 0.19
CCDC68Q9H2F9 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.21■□□□□ 0.19
CCDC68Q9H2F9 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.21■□□□□ 0.19
CCDC68Q9H2F9 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CCDC68Q9H2F9 AC023824.1-201ENST00000562945 2975 ntBASIC16.21■□□□□ 0.19
CCDC68Q9H2F9 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC68Q9H2F9 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CCDC68Q9H2F9 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC16.21■□□□□ 0.19
CCDC68Q9H2F9 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC68Q9H2F9 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.21■□□□□ 0.19
CCDC68Q9H2F9 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC68Q9H2F9 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.21■□□□□ 0.19
CCDC68Q9H2F9 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC68Q9H2F9 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.21■□□□□ 0.19
CCDC68Q9H2F9 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.21■□□□□ 0.19
CCDC68Q9H2F9 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
CCDC68Q9H2F9 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
CCDC68Q9H2F9 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CCDC68Q9H2F9 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC68Q9H2F9 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC68Q9H2F9 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC68Q9H2F9 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.21■□□□□ 0.19
CCDC68Q9H2F9 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC68Q9H2F9 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC68Q9H2F9 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CCDC68Q9H2F9 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.21■□□□□ 0.19
CCDC68Q9H2F9 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC68Q9H2F9 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.21■□□□□ 0.19
CCDC68Q9H2F9 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.21■□□□□ 0.19
CCDC68Q9H2F9 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.21■□□□□ 0.19
CCDC68Q9H2F9 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.21■□□□□ 0.19
CCDC68Q9H2F9 AP002472.1-201ENST00000577490 586 ntBASIC16.21■□□□□ 0.19
CCDC68Q9H2F9 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.21■□□□□ 0.19
CCDC68Q9H2F9 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC68Q9H2F9 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC68Q9H2F9 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC68Q9H2F9 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC68Q9H2F9 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC68Q9H2F9 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC68Q9H2F9 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC68Q9H2F9 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC68Q9H2F9 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
CCDC68Q9H2F9 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.18
CCDC68Q9H2F9 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CCDC68Q9H2F9 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.18
CCDC68Q9H2F9 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.21■□□□□ 0.18
CCDC68Q9H2F9 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CCDC68Q9H2F9 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.2■□□□□ 0.18
CCDC68Q9H2F9 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC68Q9H2F9 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC68Q9H2F9 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CCDC68Q9H2F9 AC099063.4-201ENST00000641099 1602 ntBASIC16.2■□□□□ 0.18
CCDC68Q9H2F9 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC68Q9H2F9 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC68Q9H2F9 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC68Q9H2F9 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC68Q9H2F9 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
CCDC68Q9H2F9 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC68Q9H2F9 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CCDC68Q9H2F9 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC68Q9H2F9 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CCDC68Q9H2F9 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CCDC68Q9H2F9 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
CCDC68Q9H2F9 MIR940-201ENST00000401276 94 ntBASIC16.2■□□□□ 0.18
CCDC68Q9H2F9 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.2■□□□□ 0.18
CCDC68Q9H2F9 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC68Q9H2F9 RARRES2P8-201ENST00000566335 367 ntBASIC16.2■□□□□ 0.18
CCDC68Q9H2F9 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.2■□□□□ 0.18
CCDC68Q9H2F9 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.2■□□□□ 0.18
CCDC68Q9H2F9 AC092865.6-201ENST00000642101 219 ntBASIC16.2■□□□□ 0.18
CCDC68Q9H2F9 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC68Q9H2F9 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC68Q9H2F9 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC68Q9H2F9 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CCDC68Q9H2F9 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC68Q9H2F9 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC68Q9H2F9 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.2■□□□□ 0.18
CCDC68Q9H2F9 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC68Q9H2F9 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC68Q9H2F9 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC68Q9H2F9 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC68Q9H2F9 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC68Q9H2F9 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.2■□□□□ 0.18
CCDC68Q9H2F9 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.2■□□□□ 0.18
CCDC68Q9H2F9 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC68Q9H2F9 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.19■□□□□ 0.18
CCDC68Q9H2F9 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC68Q9H2F9 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC68Q9H2F9 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.19■□□□□ 0.18
CCDC68Q9H2F9 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms