Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SLIRPQ9GZT3 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLIRPQ9GZT3 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.16□□□□□ -0.14
SLIRPQ9GZT3 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLIRPQ9GZT3 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.16□□□□□ -0.14
SLIRPQ9GZT3 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLIRPQ9GZT3 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SLIRPQ9GZT3 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SLIRPQ9GZT3 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.16□□□□□ -0.14
SLIRPQ9GZT3 MMP23A-201ENST00000234610 1017 ntBASIC14.16□□□□□ -0.14
SLIRPQ9GZT3 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLIRPQ9GZT3 ARMC10P1-201ENST00000313754 855 ntBASIC14.16□□□□□ -0.14
SLIRPQ9GZT3 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SLIRPQ9GZT3 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLIRPQ9GZT3 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SLIRPQ9GZT3 HLA-L-209ENST00000420110 1011 ntBASIC14.16□□□□□ -0.14
SLIRPQ9GZT3 PAWRP1-201ENST00000451083 565 ntBASIC14.16□□□□□ -0.14
SLIRPQ9GZT3 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC14.16□□□□□ -0.14
SLIRPQ9GZT3 AC098590.1-201ENST00000468126 897 ntBASIC14.16□□□□□ -0.14
SLIRPQ9GZT3 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
SLIRPQ9GZT3 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC14.16□□□□□ -0.14
SLIRPQ9GZT3 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SLIRPQ9GZT3 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.16□□□□□ -0.14
SLIRPQ9GZT3 MIR4785-201ENST00000585005 73 ntBASIC14.16□□□□□ -0.14
SLIRPQ9GZT3 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SLIRPQ9GZT3 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.16□□□□□ -0.14
SLIRPQ9GZT3 AC124864.1-201ENST00000623408 392 ntBASIC14.16□□□□□ -0.14
SLIRPQ9GZT3 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SLIRPQ9GZT3 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
SLIRPQ9GZT3 LGALS8-AS1-201ENST00000487567 1457 ntBASIC14.16□□□□□ -0.14
SLIRPQ9GZT3 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLIRPQ9GZT3 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.16□□□□□ -0.14
SLIRPQ9GZT3 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLIRPQ9GZT3 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SLIRPQ9GZT3 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.16□□□□□ -0.14
SLIRPQ9GZT3 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SLIRPQ9GZT3 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLIRPQ9GZT3 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLIRPQ9GZT3 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLIRPQ9GZT3 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLIRPQ9GZT3 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLIRPQ9GZT3 AC097359.2-201ENST00000604992 2389 ntBASIC14.16□□□□□ -0.14
SLIRPQ9GZT3 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLIRPQ9GZT3 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLIRPQ9GZT3 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLIRPQ9GZT3 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SLIRPQ9GZT3 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.16□□□□□ -0.14
SLIRPQ9GZT3 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC14.15□□□□□ -0.14
SLIRPQ9GZT3 SIGLEC16-201ENST00000599858 1437 ntBASIC14.15□□□□□ -0.14
SLIRPQ9GZT3 OR2I1P-210ENST00000642037 4691 ntBASIC14.15□□□□□ -0.14
SLIRPQ9GZT3 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SLIRPQ9GZT3 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.15□□□□□ -0.14
SLIRPQ9GZT3 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLIRPQ9GZT3 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.15□□□□□ -0.14
SLIRPQ9GZT3 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLIRPQ9GZT3 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SLIRPQ9GZT3 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLIRPQ9GZT3 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SLIRPQ9GZT3 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLIRPQ9GZT3 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SLIRPQ9GZT3 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLIRPQ9GZT3 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLIRPQ9GZT3 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLIRPQ9GZT3 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLIRPQ9GZT3 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLIRPQ9GZT3 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.15□□□□□ -0.14
SLIRPQ9GZT3 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.15□□□□□ -0.14
SLIRPQ9GZT3 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLIRPQ9GZT3 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.15□□□□□ -0.14
SLIRPQ9GZT3 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SLIRPQ9GZT3 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
SLIRPQ9GZT3 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SLIRPQ9GZT3 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.15□□□□□ -0.14
SLIRPQ9GZT3 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLIRPQ9GZT3 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLIRPQ9GZT3 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.15□□□□□ -0.14
SLIRPQ9GZT3 CRAT-202ENST00000393384 973 ntTSL 2 BASIC14.15□□□□□ -0.14
SLIRPQ9GZT3 FAM8A3P-201ENST00000427218 844 ntBASIC14.15□□□□□ -0.14
SLIRPQ9GZT3 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.15□□□□□ -0.14
SLIRPQ9GZT3 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC14.15□□□□□ -0.14
SLIRPQ9GZT3 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.15□□□□□ -0.14
SLIRPQ9GZT3 VENTXP5-201ENST00000523979 775 ntBASIC14.15□□□□□ -0.14
SLIRPQ9GZT3 AC011840.4-201ENST00000578471 627 ntBASIC14.15□□□□□ -0.14
SLIRPQ9GZT3 LINC01023-201ENST00000606054 436 ntBASIC14.15□□□□□ -0.14
SLIRPQ9GZT3 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SLIRPQ9GZT3 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SLIRPQ9GZT3 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLIRPQ9GZT3 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLIRPQ9GZT3 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SLIRPQ9GZT3 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLIRPQ9GZT3 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SLIRPQ9GZT3 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
SLIRPQ9GZT3 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.15□□□□□ -0.14
SLIRPQ9GZT3 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLIRPQ9GZT3 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
SLIRPQ9GZT3 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.15□□□□□ -0.14
SLIRPQ9GZT3 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
SLIRPQ9GZT3 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.15□□□□□ -0.15
SLIRPQ9GZT3 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
SLIRPQ9GZT3 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms