Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
UPK3BQ9BT76 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC11.28□□□□□ -0.6
UPK3BQ9BT76 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
UPK3BQ9BT76 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
UPK3BQ9BT76 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UPK3BQ9BT76 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
UPK3BQ9BT76 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
UPK3BQ9BT76 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UPK3BQ9BT76 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC11.28□□□□□ -0.6
UPK3BQ9BT76 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
UPK3BQ9BT76 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
UPK3BQ9BT76 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
UPK3BQ9BT76 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
UPK3BQ9BT76 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
UPK3BQ9BT76 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC11.27□□□□□ -0.6
UPK3BQ9BT76 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC11.27□□□□□ -0.6
UPK3BQ9BT76 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC11.27□□□□□ -0.6
UPK3BQ9BT76 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
UPK3BQ9BT76 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
UPK3BQ9BT76 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
UPK3BQ9BT76 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
UPK3BQ9BT76 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
UPK3BQ9BT76 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC11.27□□□□□ -0.6
UPK3BQ9BT76 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
UPK3BQ9BT76 AL512652.2-201ENST00000625156 1716 ntBASIC11.27□□□□□ -0.61
UPK3BQ9BT76 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
UPK3BQ9BT76 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UPK3BQ9BT76 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
UPK3BQ9BT76 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
UPK3BQ9BT76 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC11.27□□□□□ -0.61
UPK3BQ9BT76 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UPK3BQ9BT76 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
UPK3BQ9BT76 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UPK3BQ9BT76 GPAA1P2-202ENST00000606848 1787 ntBASIC11.27□□□□□ -0.61
UPK3BQ9BT76 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
UPK3BQ9BT76 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
UPK3BQ9BT76 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UPK3BQ9BT76 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
UPK3BQ9BT76 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
UPK3BQ9BT76 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
UPK3BQ9BT76 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UPK3BQ9BT76 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
UPK3BQ9BT76 VMA21-202ENST00000370361 693 ntTSL 5 BASIC11.27□□□□□ -0.61
UPK3BQ9BT76 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UPK3BQ9BT76 FAM220BP-201ENST00000377689 816 ntBASIC11.27□□□□□ -0.61
UPK3BQ9BT76 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC11.27□□□□□ -0.61
UPK3BQ9BT76 KLF2P3-201ENST00000451977 1087 ntBASIC11.27□□□□□ -0.61
UPK3BQ9BT76 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC11.27□□□□□ -0.61
UPK3BQ9BT76 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC11.27□□□□□ -0.61
UPK3BQ9BT76 RARRES2P9-201ENST00000565168 469 ntBASIC11.27□□□□□ -0.61
UPK3BQ9BT76 AL138918.1-201ENST00000568306 659 ntBASIC11.27□□□□□ -0.61
UPK3BQ9BT76 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC11.27□□□□□ -0.61
UPK3BQ9BT76 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC11.27□□□□□ -0.61
UPK3BQ9BT76 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
UPK3BQ9BT76 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC11.27□□□□□ -0.61
UPK3BQ9BT76 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
UPK3BQ9BT76 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UPK3BQ9BT76 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UPK3BQ9BT76 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
UPK3BQ9BT76 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
UPK3BQ9BT76 TUBB3P1-201ENST00000405796 1332 ntBASIC11.27□□□□□ -0.61
UPK3BQ9BT76 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
UPK3BQ9BT76 AMT-206ENST00000458307 1860 ntTSL 2 BASIC11.27□□□□□ -0.61
UPK3BQ9BT76 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
UPK3BQ9BT76 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UPK3BQ9BT76 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UPK3BQ9BT76 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UPK3BQ9BT76 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
UPK3BQ9BT76 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
UPK3BQ9BT76 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
UPK3BQ9BT76 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC11.27□□□□□ -0.61
UPK3BQ9BT76 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC11.27□□□□□ -0.61
UPK3BQ9BT76 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
UPK3BQ9BT76 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
UPK3BQ9BT76 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC11.27□□□□□ -0.61
UPK3BQ9BT76 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
UPK3BQ9BT76 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UPK3BQ9BT76 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
UPK3BQ9BT76 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UPK3BQ9BT76 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
UPK3BQ9BT76 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
UPK3BQ9BT76 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
UPK3BQ9BT76 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UPK3BQ9BT76 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
UPK3BQ9BT76 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC11.26□□□□□ -0.61
UPK3BQ9BT76 CES3-203ENST00000543856 3178 ntTSL 2 BASIC11.26□□□□□ -0.61
UPK3BQ9BT76 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UPK3BQ9BT76 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UPK3BQ9BT76 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
UPK3BQ9BT76 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
UPK3BQ9BT76 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
UPK3BQ9BT76 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UPK3BQ9BT76 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC11.26□□□□□ -0.61
UPK3BQ9BT76 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UPK3BQ9BT76 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UPK3BQ9BT76 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
UPK3BQ9BT76 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC11.26□□□□□ -0.61
UPK3BQ9BT76 AC140878.1-201ENST00000565277 250 ntBASIC11.26□□□□□ -0.61
UPK3BQ9BT76 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC11.26□□□□□ -0.61
UPK3BQ9BT76 SPTSSB-204ENST00000617024 1292 ntBASIC11.26□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms