Protein–RNA interactions for Protein: Q96TA2

YME1L1, ATP-dependent zinc metalloprotease YME1L1, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YME1L1Q96TA2 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.17■□□□□ 0.34
YME1L1Q96TA2 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
YME1L1Q96TA2 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.17■□□□□ 0.34
YME1L1Q96TA2 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.17■□□□□ 0.34
YME1L1Q96TA2 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
YME1L1Q96TA2 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
YME1L1Q96TA2 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
YME1L1Q96TA2 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
YME1L1Q96TA2 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
YME1L1Q96TA2 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
YME1L1Q96TA2 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
YME1L1Q96TA2 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
YME1L1Q96TA2 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.16■□□□□ 0.34
YME1L1Q96TA2 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
YME1L1Q96TA2 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.16■□□□□ 0.34
YME1L1Q96TA2 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.16■□□□□ 0.34
YME1L1Q96TA2 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
YME1L1Q96TA2 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
YME1L1Q96TA2 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
YME1L1Q96TA2 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.16■□□□□ 0.34
YME1L1Q96TA2 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
YME1L1Q96TA2 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.16■□□□□ 0.34
YME1L1Q96TA2 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
YME1L1Q96TA2 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
YME1L1Q96TA2 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
YME1L1Q96TA2 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.16■□□□□ 0.34
YME1L1Q96TA2 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.16■□□□□ 0.34
YME1L1Q96TA2 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
YME1L1Q96TA2 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
YME1L1Q96TA2 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
YME1L1Q96TA2 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
YME1L1Q96TA2 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
YME1L1Q96TA2 TARDBPP1-201ENST00000442013 1203 ntBASIC17.16■□□□□ 0.34
YME1L1Q96TA2 EEF1DP4-201ENST00000446006 880 ntBASIC17.16■□□□□ 0.34
YME1L1Q96TA2 AC007551.1-201ENST00000457394 519 ntBASIC17.16■□□□□ 0.34
YME1L1Q96TA2 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC17.16■□□□□ 0.34
YME1L1Q96TA2 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
YME1L1Q96TA2 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
YME1L1Q96TA2 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC17.16■□□□□ 0.34
YME1L1Q96TA2 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
YME1L1Q96TA2 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.16■□□□□ 0.34
YME1L1Q96TA2 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC17.16■□□□□ 0.34
YME1L1Q96TA2 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC17.16■□□□□ 0.34
YME1L1Q96TA2 AC103810.3-201ENST00000583567 96 ntBASIC17.16■□□□□ 0.34
YME1L1Q96TA2 AC244093.1-201ENST00000610837 814 ntBASIC17.16■□□□□ 0.34
YME1L1Q96TA2 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
YME1L1Q96TA2 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
YME1L1Q96TA2 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
YME1L1Q96TA2 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
YME1L1Q96TA2 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
YME1L1Q96TA2 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.16■□□□□ 0.34
YME1L1Q96TA2 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
YME1L1Q96TA2 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.16■□□□□ 0.34
YME1L1Q96TA2 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
YME1L1Q96TA2 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
YME1L1Q96TA2 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.15■□□□□ 0.34
YME1L1Q96TA2 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
YME1L1Q96TA2 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
YME1L1Q96TA2 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.15■□□□□ 0.34
YME1L1Q96TA2 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
YME1L1Q96TA2 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
YME1L1Q96TA2 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
YME1L1Q96TA2 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
YME1L1Q96TA2 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
YME1L1Q96TA2 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
YME1L1Q96TA2 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
YME1L1Q96TA2 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
YME1L1Q96TA2 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
YME1L1Q96TA2 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.15■□□□□ 0.34
YME1L1Q96TA2 HAUS4P1-201ENST00000406739 1145 ntBASIC17.15■□□□□ 0.34
YME1L1Q96TA2 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
YME1L1Q96TA2 PFN1P12-201ENST00000455938 534 ntBASIC17.15■□□□□ 0.34
YME1L1Q96TA2 AC099548.2-209ENST00000480264 625 ntBASIC17.15■□□□□ 0.34
YME1L1Q96TA2 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
YME1L1Q96TA2 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.15■□□□□ 0.34
YME1L1Q96TA2 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
YME1L1Q96TA2 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC17.15■□□□□ 0.34
YME1L1Q96TA2 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC17.15■□□□□ 0.34
YME1L1Q96TA2 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC17.15■□□□□ 0.34
YME1L1Q96TA2 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
YME1L1Q96TA2 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
YME1L1Q96TA2 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
YME1L1Q96TA2 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
YME1L1Q96TA2 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.15■□□□□ 0.34
YME1L1Q96TA2 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
YME1L1Q96TA2 AC011270.2-201ENST00000624293 2550 ntBASIC17.15■□□□□ 0.34
YME1L1Q96TA2 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.15■□□□□ 0.34
YME1L1Q96TA2 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
YME1L1Q96TA2 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
YME1L1Q96TA2 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC17.15■□□□□ 0.34
YME1L1Q96TA2 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
YME1L1Q96TA2 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
YME1L1Q96TA2 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.34
YME1L1Q96TA2 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
YME1L1Q96TA2 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
YME1L1Q96TA2 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.34
YME1L1Q96TA2 TP73-213ENST00000604479 1623 ntTSL 5 BASIC17.14■□□□□ 0.33
YME1L1Q96TA2 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
YME1L1Q96TA2 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
YME1L1Q96TA2 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms