Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF183Q96D59 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF183Q96D59 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF183Q96D59 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF183Q96D59 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC12.01□□□□□ -0.49
RNF183Q96D59 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF183Q96D59 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC12.01□□□□□ -0.49
RNF183Q96D59 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF183Q96D59 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF183Q96D59 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF183Q96D59 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RNF183Q96D59 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF183Q96D59 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF183Q96D59 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF183Q96D59 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC12.01□□□□□ -0.49
RNF183Q96D59 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF183Q96D59 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
RNF183Q96D59 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RNF183Q96D59 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RNF183Q96D59 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
RNF183Q96D59 DPM2-202ENST00000373110 738 ntTSL 2 BASIC12.01□□□□□ -0.49
RNF183Q96D59 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RNF183Q96D59 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC12.01□□□□□ -0.49
RNF183Q96D59 KLF2P3-201ENST00000451977 1087 ntBASIC12.01□□□□□ -0.49
RNF183Q96D59 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC12.01□□□□□ -0.49
RNF183Q96D59 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC12.01□□□□□ -0.49
RNF183Q96D59 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF183Q96D59 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC12.01□□□□□ -0.49
RNF183Q96D59 QPRT-203ENST00000562473 579 ntTSL 3 BASIC12.01□□□□□ -0.49
RNF183Q96D59 AC051619.7-201ENST00000568314 623 ntBASIC12.01□□□□□ -0.49
RNF183Q96D59 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC12.01□□□□□ -0.49
RNF183Q96D59 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC12.01□□□□□ -0.49
RNF183Q96D59 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RNF183Q96D59 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC12.01□□□□□ -0.49
RNF183Q96D59 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF183Q96D59 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC12.01□□□□□ -0.49
RNF183Q96D59 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC12.01□□□□□ -0.49
RNF183Q96D59 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC12.01□□□□□ -0.49
RNF183Q96D59 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
RNF183Q96D59 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF183Q96D59 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF183Q96D59 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
RNF183Q96D59 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC12.01□□□□□ -0.49
RNF183Q96D59 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF183Q96D59 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF183Q96D59 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RNF183Q96D59 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RNF183Q96D59 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC12.01□□□□□ -0.49
RNF183Q96D59 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF183Q96D59 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC12.01□□□□□ -0.49
RNF183Q96D59 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF183Q96D59 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
RNF183Q96D59 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF183Q96D59 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF183Q96D59 BANP-204ENST00000393208 2283 ntTSL 2 BASIC12□□□□□ -0.49
RNF183Q96D59 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RNF183Q96D59 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC12□□□□□ -0.49
RNF183Q96D59 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RNF183Q96D59 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC12□□□□□ -0.49
RNF183Q96D59 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RNF183Q96D59 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RNF183Q96D59 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RNF183Q96D59 SNX33P1-201ENST00000592116 1762 ntBASIC12□□□□□ -0.49
RNF183Q96D59 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC12□□□□□ -0.49
RNF183Q96D59 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
RNF183Q96D59 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC12□□□□□ -0.49
RNF183Q96D59 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RNF183Q96D59 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC12□□□□□ -0.49
RNF183Q96D59 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC12□□□□□ -0.49
RNF183Q96D59 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RNF183Q96D59 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
RNF183Q96D59 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RNF183Q96D59 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RNF183Q96D59 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
RNF183Q96D59 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RNF183Q96D59 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC12□□□□□ -0.49
RNF183Q96D59 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC12□□□□□ -0.49
RNF183Q96D59 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RNF183Q96D59 AC107890.1-201ENST00000422478 521 ntBASIC12□□□□□ -0.49
RNF183Q96D59 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
RNF183Q96D59 AC142381.1-201ENST00000426099 345 ntBASIC12□□□□□ -0.49
RNF183Q96D59 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC12□□□□□ -0.49
RNF183Q96D59 AC125807.1-201ENST00000483097 614 ntBASIC12□□□□□ -0.49
RNF183Q96D59 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC12□□□□□ -0.49
RNF183Q96D59 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC12□□□□□ -0.49
RNF183Q96D59 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC12□□□□□ -0.49
RNF183Q96D59 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC12□□□□□ -0.49
RNF183Q96D59 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC12□□□□□ -0.49
RNF183Q96D59 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC12□□□□□ -0.49
RNF183Q96D59 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC12□□□□□ -0.49
RNF183Q96D59 MIR6080-201ENST00000617359 66 ntBASIC12□□□□□ -0.49
RNF183Q96D59 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC12□□□□□ -0.49
RNF183Q96D59 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC12□□□□□ -0.49
RNF183Q96D59 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RNF183Q96D59 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
RNF183Q96D59 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
RNF183Q96D59 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
RNF183Q96D59 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC12□□□□□ -0.49
RNF183Q96D59 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
RNF183Q96D59 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms