Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
RAB40AQ8WXH6 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40AQ8WXH6 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40AQ8WXH6 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
RAB40AQ8WXH6 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB40AQ8WXH6 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40AQ8WXH6 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
RAB40AQ8WXH6 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40AQ8WXH6 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB40AQ8WXH6 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB40AQ8WXH6 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40AQ8WXH6 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40AQ8WXH6 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
RAB40AQ8WXH6 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.21□□□□□ -0.13
RAB40AQ8WXH6 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40AQ8WXH6 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.21□□□□□ -0.13
RAB40AQ8WXH6 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40AQ8WXH6 PI4KAP1-204ENST00000612579 1703 ntBASIC14.21□□□□□ -0.13
RAB40AQ8WXH6 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40AQ8WXH6 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.21□□□□□ -0.13
RAB40AQ8WXH6 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40AQ8WXH6 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40AQ8WXH6 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.21□□□□□ -0.13
RAB40AQ8WXH6 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40AQ8WXH6 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.21□□□□□ -0.13
RAB40AQ8WXH6 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40AQ8WXH6 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
RAB40AQ8WXH6 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40AQ8WXH6 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40AQ8WXH6 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.21□□□□□ -0.13
RAB40AQ8WXH6 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.13
RAB40AQ8WXH6 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.21□□□□□ -0.13
RAB40AQ8WXH6 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
RAB40AQ8WXH6 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.21□□□□□ -0.13
RAB40AQ8WXH6 VN2R19P-201ENST00000442399 1052 ntBASIC14.21□□□□□ -0.13
RAB40AQ8WXH6 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40AQ8WXH6 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.21□□□□□ -0.13
RAB40AQ8WXH6 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.21□□□□□ -0.13
RAB40AQ8WXH6 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.21□□□□□ -0.13
RAB40AQ8WXH6 AC092865.5-201ENST00000545435 363 ntBASIC14.21□□□□□ -0.13
RAB40AQ8WXH6 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.21□□□□□ -0.13
RAB40AQ8WXH6 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.21□□□□□ -0.13
RAB40AQ8WXH6 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.21□□□□□ -0.13
RAB40AQ8WXH6 AC020765.3-201ENST00000613051 740 ntBASIC14.21□□□□□ -0.13
RAB40AQ8WXH6 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
RAB40AQ8WXH6 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.21□□□□□ -0.13
RAB40AQ8WXH6 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
RAB40AQ8WXH6 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40AQ8WXH6 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.21□□□□□ -0.13
RAB40AQ8WXH6 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40AQ8WXH6 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
RAB40AQ8WXH6 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
RAB40AQ8WXH6 AL109954.1-202ENST00000564051 2148 ntBASIC14.21□□□□□ -0.13
RAB40AQ8WXH6 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RAB40AQ8WXH6 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
RAB40AQ8WXH6 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.14
RAB40AQ8WXH6 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
RAB40AQ8WXH6 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RAB40AQ8WXH6 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
RAB40AQ8WXH6 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.14
RAB40AQ8WXH6 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RAB40AQ8WXH6 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
RAB40AQ8WXH6 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
RAB40AQ8WXH6 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.21□□□□□ -0.14
RAB40AQ8WXH6 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
RAB40AQ8WXH6 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
RAB40AQ8WXH6 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.2□□□□□ -0.14
RAB40AQ8WXH6 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.2□□□□□ -0.14
RAB40AQ8WXH6 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.2□□□□□ -0.14
RAB40AQ8WXH6 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40AQ8WXH6 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40AQ8WXH6 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40AQ8WXH6 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40AQ8WXH6 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40AQ8WXH6 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40AQ8WXH6 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
RAB40AQ8WXH6 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.2□□□□□ -0.14
RAB40AQ8WXH6 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40AQ8WXH6 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40AQ8WXH6 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.2□□□□□ -0.14
RAB40AQ8WXH6 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40AQ8WXH6 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.2□□□□□ -0.14
RAB40AQ8WXH6 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40AQ8WXH6 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40AQ8WXH6 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40AQ8WXH6 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40AQ8WXH6 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40AQ8WXH6 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40AQ8WXH6 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
RAB40AQ8WXH6 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.2□□□□□ -0.14
RAB40AQ8WXH6 BX842568.4-201ENST00000421222 227 ntBASIC14.2□□□□□ -0.14
RAB40AQ8WXH6 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.2□□□□□ -0.14
RAB40AQ8WXH6 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.2□□□□□ -0.14
RAB40AQ8WXH6 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.2□□□□□ -0.14
RAB40AQ8WXH6 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.2□□□□□ -0.14
RAB40AQ8WXH6 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.2□□□□□ -0.14
RAB40AQ8WXH6 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.2□□□□□ -0.14
RAB40AQ8WXH6 AC091167.2-201ENST00000579581 588 ntBASIC14.2□□□□□ -0.14
RAB40AQ8WXH6 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.2□□□□□ -0.14
RAB40AQ8WXH6 GPALPP1-207ENST00000611650 899 ntBASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms