Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.61□□□□□ -0.23
RTN4IP1Q8WWV3 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RTN4IP1Q8WWV3 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RTN4IP1Q8WWV3 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTN4IP1Q8WWV3 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC13.61□□□□□ -0.23
RTN4IP1Q8WWV3 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC13.61□□□□□ -0.23
RTN4IP1Q8WWV3 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTN4IP1Q8WWV3 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTN4IP1Q8WWV3 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RTN4IP1Q8WWV3 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
RTN4IP1Q8WWV3 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTN4IP1Q8WWV3 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTN4IP1Q8WWV3 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTN4IP1Q8WWV3 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RTN4IP1Q8WWV3 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTN4IP1Q8WWV3 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC13.61□□□□□ -0.23
RTN4IP1Q8WWV3 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
RTN4IP1Q8WWV3 CRYGEP-201ENST00000412192 528 ntBASIC13.61□□□□□ -0.23
RTN4IP1Q8WWV3 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
RTN4IP1Q8WWV3 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC13.61□□□□□ -0.23
RTN4IP1Q8WWV3 VN2R19P-201ENST00000442399 1052 ntBASIC13.61□□□□□ -0.23
RTN4IP1Q8WWV3 FAM185BP-201ENST00000443595 716 ntBASIC13.61□□□□□ -0.23
RTN4IP1Q8WWV3 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC13.61□□□□□ -0.23
RTN4IP1Q8WWV3 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC13.61□□□□□ -0.23
RTN4IP1Q8WWV3 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC13.61□□□□□ -0.23
RTN4IP1Q8WWV3 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
RTN4IP1Q8WWV3 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC13.61□□□□□ -0.23
RTN4IP1Q8WWV3 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC13.61□□□□□ -0.23
RTN4IP1Q8WWV3 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RTN4IP1Q8WWV3 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
RTN4IP1Q8WWV3 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC13.61□□□□□ -0.23
RTN4IP1Q8WWV3 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTN4IP1Q8WWV3 Z83851.2-201ENST00000609564 659 ntBASIC13.61□□□□□ -0.23
RTN4IP1Q8WWV3 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RTN4IP1Q8WWV3 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC13.61□□□□□ -0.23
RTN4IP1Q8WWV3 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.61□□□□□ -0.23
RTN4IP1Q8WWV3 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTN4IP1Q8WWV3 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTN4IP1Q8WWV3 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTN4IP1Q8WWV3 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RTN4IP1Q8WWV3 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RTN4IP1Q8WWV3 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.61□□□□□ -0.23
RTN4IP1Q8WWV3 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTN4IP1Q8WWV3 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTN4IP1Q8WWV3 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTN4IP1Q8WWV3 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RTN4IP1Q8WWV3 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.6□□□□□ -0.23
RTN4IP1Q8WWV3 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.6□□□□□ -0.23
RTN4IP1Q8WWV3 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.6□□□□□ -0.23
RTN4IP1Q8WWV3 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RTN4IP1Q8WWV3 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC13.6□□□□□ -0.23
RTN4IP1Q8WWV3 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RTN4IP1Q8WWV3 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.6□□□□□ -0.23
RTN4IP1Q8WWV3 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
RTN4IP1Q8WWV3 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RTN4IP1Q8WWV3 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RTN4IP1Q8WWV3 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
RTN4IP1Q8WWV3 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RTN4IP1Q8WWV3 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.6□□□□□ -0.23
RTN4IP1Q8WWV3 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RTN4IP1Q8WWV3 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
RTN4IP1Q8WWV3 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RTN4IP1Q8WWV3 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
RTN4IP1Q8WWV3 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
RTN4IP1Q8WWV3 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RTN4IP1Q8WWV3 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC13.6□□□□□ -0.23
RTN4IP1Q8WWV3 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RTN4IP1Q8WWV3 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RTN4IP1Q8WWV3 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
RTN4IP1Q8WWV3 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RTN4IP1Q8WWV3 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
RTN4IP1Q8WWV3 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RTN4IP1Q8WWV3 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RTN4IP1Q8WWV3 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RTN4IP1Q8WWV3 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RTN4IP1Q8WWV3 CXCL1P1-201ENST00000502804 216 ntBASIC13.6□□□□□ -0.23
RTN4IP1Q8WWV3 MMP17-203ENST00000535004 719 ntTSL 3 BASIC13.6□□□□□ -0.23
RTN4IP1Q8WWV3 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RTN4IP1Q8WWV3 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RTN4IP1Q8WWV3 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RTN4IP1Q8WWV3 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RTN4IP1Q8WWV3 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
RTN4IP1Q8WWV3 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.6□□□□□ -0.23
RTN4IP1Q8WWV3 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RTN4IP1Q8WWV3 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RTN4IP1Q8WWV3 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC13.6□□□□□ -0.23
RTN4IP1Q8WWV3 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
RTN4IP1Q8WWV3 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
RTN4IP1Q8WWV3 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RTN4IP1Q8WWV3 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RTN4IP1Q8WWV3 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RTN4IP1Q8WWV3 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RTN4IP1Q8WWV3 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RTN4IP1Q8WWV3 AL592424.1-201ENST00000563624 1536 ntBASIC13.59□□□□□ -0.23
RTN4IP1Q8WWV3 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RTN4IP1Q8WWV3 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RTN4IP1Q8WWV3 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RTN4IP1Q8WWV3 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.59□□□□□ -0.23
RTN4IP1Q8WWV3 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RTN4IP1Q8WWV3 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms