Protein–RNA interactions for Protein: Q8WWF3

SSMEM1, Serine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSMEM1Q8WWF3 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC13.4□□□□□ -0.26
SSMEM1Q8WWF3 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SSMEM1Q8WWF3 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
SSMEM1Q8WWF3 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
SSMEM1Q8WWF3 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC13.4□□□□□ -0.26
SSMEM1Q8WWF3 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SSMEM1Q8WWF3 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
SSMEM1Q8WWF3 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SSMEM1Q8WWF3 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SSMEM1Q8WWF3 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.4□□□□□ -0.26
SSMEM1Q8WWF3 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
SSMEM1Q8WWF3 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
SSMEM1Q8WWF3 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC13.4□□□□□ -0.26
SSMEM1Q8WWF3 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SSMEM1Q8WWF3 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SSMEM1Q8WWF3 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
SSMEM1Q8WWF3 PTMS-202ENST00000389462 773 ntTSL 2 BASIC13.4□□□□□ -0.26
SSMEM1Q8WWF3 AC107890.1-201ENST00000422478 521 ntBASIC13.4□□□□□ -0.26
SSMEM1Q8WWF3 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC13.4□□□□□ -0.26
SSMEM1Q8WWF3 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.4□□□□□ -0.26
SSMEM1Q8WWF3 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.4□□□□□ -0.26
SSMEM1Q8WWF3 KLF2P3-201ENST00000451977 1087 ntBASIC13.4□□□□□ -0.26
SSMEM1Q8WWF3 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13.4□□□□□ -0.26
SSMEM1Q8WWF3 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC13.4□□□□□ -0.26
SSMEM1Q8WWF3 AC125807.1-201ENST00000483097 614 ntBASIC13.4□□□□□ -0.26
SSMEM1Q8WWF3 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.4□□□□□ -0.26
SSMEM1Q8WWF3 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC13.4□□□□□ -0.26
SSMEM1Q8WWF3 DUT-210ENST00000559935 569 ntTSL 3 BASIC13.4□□□□□ -0.26
SSMEM1Q8WWF3 LINC01225-203ENST00000563550 1244 ntBASIC13.4□□□□□ -0.26
SSMEM1Q8WWF3 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SSMEM1Q8WWF3 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SSMEM1Q8WWF3 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SSMEM1Q8WWF3 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC13.4□□□□□ -0.26
SSMEM1Q8WWF3 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.4□□□□□ -0.26
SSMEM1Q8WWF3 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
SSMEM1Q8WWF3 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SSMEM1Q8WWF3 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SSMEM1Q8WWF3 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC13.4□□□□□ -0.26
SSMEM1Q8WWF3 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SSMEM1Q8WWF3 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.4□□□□□ -0.26
SSMEM1Q8WWF3 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
SSMEM1Q8WWF3 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SSMEM1Q8WWF3 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
SSMEM1Q8WWF3 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC13.4□□□□□ -0.26
SSMEM1Q8WWF3 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC13.4□□□□□ -0.26
SSMEM1Q8WWF3 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SSMEM1Q8WWF3 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC13.4□□□□□ -0.26
SSMEM1Q8WWF3 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.4□□□□□ -0.26
SSMEM1Q8WWF3 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SSMEM1Q8WWF3 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.4□□□□□ -0.26
SSMEM1Q8WWF3 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
SSMEM1Q8WWF3 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSMEM1Q8WWF3 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSMEM1Q8WWF3 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
SSMEM1Q8WWF3 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSMEM1Q8WWF3 AC024909.3-201ENST00000611513 2257 ntBASIC13.39□□□□□ -0.27
SSMEM1Q8WWF3 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SSMEM1Q8WWF3 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
SSMEM1Q8WWF3 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSMEM1Q8WWF3 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
SSMEM1Q8WWF3 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSMEM1Q8WWF3 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSMEM1Q8WWF3 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SSMEM1Q8WWF3 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC13.39□□□□□ -0.27
SSMEM1Q8WWF3 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSMEM1Q8WWF3 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
SSMEM1Q8WWF3 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSMEM1Q8WWF3 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
SSMEM1Q8WWF3 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSMEM1Q8WWF3 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SSMEM1Q8WWF3 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
SSMEM1Q8WWF3 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSMEM1Q8WWF3 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.39□□□□□ -0.27
SSMEM1Q8WWF3 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.39□□□□□ -0.27
SSMEM1Q8WWF3 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.39□□□□□ -0.27
SSMEM1Q8WWF3 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.39□□□□□ -0.27
SSMEM1Q8WWF3 BCRP1-201ENST00000444246 691 ntBASIC13.39□□□□□ -0.27
SSMEM1Q8WWF3 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
SSMEM1Q8WWF3 KRT18P34-201ENST00000488218 1270 ntBASIC13.39□□□□□ -0.27
SSMEM1Q8WWF3 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC13.39□□□□□ -0.27
SSMEM1Q8WWF3 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC13.39□□□□□ -0.27
SSMEM1Q8WWF3 AC027307.2-201ENST00000591252 911 ntBASIC13.39□□□□□ -0.27
SSMEM1Q8WWF3 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSMEM1Q8WWF3 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC13.39□□□□□ -0.27
SSMEM1Q8WWF3 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SSMEM1Q8WWF3 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
SSMEM1Q8WWF3 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSMEM1Q8WWF3 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSMEM1Q8WWF3 AC016027.1-202ENST00000607927 1699 ntBASIC13.39□□□□□ -0.27
SSMEM1Q8WWF3 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SSMEM1Q8WWF3 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSMEM1Q8WWF3 BANP-201ENST00000286122 2368 ntTSL 5 BASIC13.39□□□□□ -0.27
SSMEM1Q8WWF3 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSMEM1Q8WWF3 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SSMEM1Q8WWF3 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
SSMEM1Q8WWF3 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
SSMEM1Q8WWF3 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
SSMEM1Q8WWF3 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.39□□□□□ -0.27
SSMEM1Q8WWF3 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSMEM1Q8WWF3 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms