Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
CCDC107Q8WV48 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
CCDC107Q8WV48 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CCDC107Q8WV48 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
CCDC107Q8WV48 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14□□□□□ -0.17
CCDC107Q8WV48 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCDC107Q8WV48 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC107Q8WV48 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC13.99□□□□□ -0.17
CCDC107Q8WV48 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC107Q8WV48 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC107Q8WV48 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.99□□□□□ -0.17
CCDC107Q8WV48 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC107Q8WV48 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC107Q8WV48 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC107Q8WV48 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC107Q8WV48 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC107Q8WV48 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC107Q8WV48 TMBIM7P-203ENST00000641617 1718 ntBASIC13.99□□□□□ -0.17
CCDC107Q8WV48 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC107Q8WV48 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC107Q8WV48 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CCDC107Q8WV48 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CCDC107Q8WV48 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC107Q8WV48 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CCDC107Q8WV48 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC107Q8WV48 MIR648-201ENST00000385046 94 ntBASIC13.99□□□□□ -0.17
CCDC107Q8WV48 LAGE3P1-201ENST00000425356 484 ntBASIC13.99□□□□□ -0.17
CCDC107Q8WV48 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC13.99□□□□□ -0.17
CCDC107Q8WV48 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC13.99□□□□□ -0.17
CCDC107Q8WV48 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC13.99□□□□□ -0.17
CCDC107Q8WV48 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC13.99□□□□□ -0.17
CCDC107Q8WV48 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC13.99□□□□□ -0.17
CCDC107Q8WV48 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC13.99□□□□□ -0.17
CCDC107Q8WV48 SLC25A6P2-201ENST00000497974 877 ntBASIC13.99□□□□□ -0.17
CCDC107Q8WV48 OR7E14P-202ENST00000530490 1290 ntBASIC13.99□□□□□ -0.17
CCDC107Q8WV48 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC13.99□□□□□ -0.17
CCDC107Q8WV48 CYGB-205ENST00000590175 830 ntTSL 3 BASIC13.99□□□□□ -0.17
CCDC107Q8WV48 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CCDC107Q8WV48 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC13.99□□□□□ -0.17
CCDC107Q8WV48 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC13.99□□□□□ -0.17
CCDC107Q8WV48 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
CCDC107Q8WV48 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CCDC107Q8WV48 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC13.99□□□□□ -0.17
CCDC107Q8WV48 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CCDC107Q8WV48 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CCDC107Q8WV48 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CCDC107Q8WV48 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC107Q8WV48 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.99□□□□□ -0.17
CCDC107Q8WV48 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC107Q8WV48 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CCDC107Q8WV48 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC107Q8WV48 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.99□□□□□ -0.17
CCDC107Q8WV48 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC107Q8WV48 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
CCDC107Q8WV48 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
CCDC107Q8WV48 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC107Q8WV48 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC107Q8WV48 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
CCDC107Q8WV48 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CCDC107Q8WV48 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC107Q8WV48 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC107Q8WV48 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC107Q8WV48 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC107Q8WV48 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.98□□□□□ -0.17
CCDC107Q8WV48 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCDC107Q8WV48 AC069224.1-201ENST00000566372 1715 ntBASIC13.98□□□□□ -0.17
CCDC107Q8WV48 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CCDC107Q8WV48 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCDC107Q8WV48 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCDC107Q8WV48 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCDC107Q8WV48 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.98□□□□□ -0.17
CCDC107Q8WV48 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CCDC107Q8WV48 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.98□□□□□ -0.17
CCDC107Q8WV48 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CCDC107Q8WV48 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.98□□□□□ -0.17
CCDC107Q8WV48 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CCDC107Q8WV48 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
CCDC107Q8WV48 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CCDC107Q8WV48 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCDC107Q8WV48 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCDC107Q8WV48 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCDC107Q8WV48 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC13.98□□□□□ -0.17
CCDC107Q8WV48 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCDC107Q8WV48 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC13.98□□□□□ -0.17
CCDC107Q8WV48 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC13.98□□□□□ -0.17
CCDC107Q8WV48 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CCDC107Q8WV48 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC13.98□□□□□ -0.17
CCDC107Q8WV48 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC13.98□□□□□ -0.17
CCDC107Q8WV48 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CCDC107Q8WV48 UNC93B7-201ENST00000509439 705 ntBASIC13.98□□□□□ -0.17
CCDC107Q8WV48 AC073648.2-201ENST00000510116 352 ntBASIC13.98□□□□□ -0.17
CCDC107Q8WV48 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC13.98□□□□□ -0.17
CCDC107Q8WV48 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC13.98□□□□□ -0.17
CCDC107Q8WV48 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC13.98□□□□□ -0.17
CCDC107Q8WV48 REXO1L3P-201ENST00000622202 1288 ntBASIC13.98□□□□□ -0.17
CCDC107Q8WV48 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC13.98□□□□□ -0.17
CCDC107Q8WV48 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC13.98□□□□□ -0.17
CCDC107Q8WV48 AL805961.1-202ENST00000641562 540 ntBASIC13.98□□□□□ -0.17
CCDC107Q8WV48 AC107918.4-202ENST00000641623 219 ntBASIC13.98□□□□□ -0.17
CCDC107Q8WV48 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms