Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB3IL1Q8TBN0 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RAB3IL1Q8TBN0 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.12■□□□□ 0.17
RAB3IL1Q8TBN0 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB3IL1Q8TBN0 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.12■□□□□ 0.17
RAB3IL1Q8TBN0 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
RAB3IL1Q8TBN0 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB3IL1Q8TBN0 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RAB3IL1Q8TBN0 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB3IL1Q8TBN0 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB3IL1Q8TBN0 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
RAB3IL1Q8TBN0 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB3IL1Q8TBN0 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
RAB3IL1Q8TBN0 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RAB3IL1Q8TBN0 ABR-205ENST00000544583 5595 ntTSL 2 BASIC16.11■□□□□ 0.17
RAB3IL1Q8TBN0 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.11■□□□□ 0.17
RAB3IL1Q8TBN0 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
RAB3IL1Q8TBN0 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB3IL1Q8TBN0 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
RAB3IL1Q8TBN0 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB3IL1Q8TBN0 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RAB3IL1Q8TBN0 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
RAB3IL1Q8TBN0 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RAB3IL1Q8TBN0 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB3IL1Q8TBN0 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB3IL1Q8TBN0 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB3IL1Q8TBN0 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.11■□□□□ 0.17
RAB3IL1Q8TBN0 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.11■□□□□ 0.17
RAB3IL1Q8TBN0 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.11■□□□□ 0.17
RAB3IL1Q8TBN0 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.11■□□□□ 0.17
RAB3IL1Q8TBN0 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.11■□□□□ 0.17
RAB3IL1Q8TBN0 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.11■□□□□ 0.17
RAB3IL1Q8TBN0 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB3IL1Q8TBN0 AP000867.3-201ENST00000524675 377 ntBASIC16.11■□□□□ 0.17
RAB3IL1Q8TBN0 KRT126P-201ENST00000549467 1181 ntBASIC16.11■□□□□ 0.17
RAB3IL1Q8TBN0 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.11■□□□□ 0.17
RAB3IL1Q8TBN0 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.11■□□□□ 0.17
RAB3IL1Q8TBN0 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB3IL1Q8TBN0 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.11■□□□□ 0.17
RAB3IL1Q8TBN0 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.11■□□□□ 0.17
RAB3IL1Q8TBN0 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RAB3IL1Q8TBN0 AC087481.3-201ENST00000602886 1894 ntBASIC16.11■□□□□ 0.17
RAB3IL1Q8TBN0 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RAB3IL1Q8TBN0 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB3IL1Q8TBN0 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RAB3IL1Q8TBN0 AC011477.6-201ENST00000604980 1927 ntBASIC16.11■□□□□ 0.17
RAB3IL1Q8TBN0 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB3IL1Q8TBN0 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB3IL1Q8TBN0 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB3IL1Q8TBN0 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB3IL1Q8TBN0 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.11■□□□□ 0.17
RAB3IL1Q8TBN0 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB3IL1Q8TBN0 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.11■□□□□ 0.17
RAB3IL1Q8TBN0 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.11■□□□□ 0.17
RAB3IL1Q8TBN0 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB3IL1Q8TBN0 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB3IL1Q8TBN0 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB3IL1Q8TBN0 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
RAB3IL1Q8TBN0 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB3IL1Q8TBN0 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.1■□□□□ 0.17
RAB3IL1Q8TBN0 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
RAB3IL1Q8TBN0 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB3IL1Q8TBN0 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB3IL1Q8TBN0 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB3IL1Q8TBN0 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
RAB3IL1Q8TBN0 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB3IL1Q8TBN0 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB3IL1Q8TBN0 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RAB3IL1Q8TBN0 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.1■□□□□ 0.17
RAB3IL1Q8TBN0 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB3IL1Q8TBN0 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
RAB3IL1Q8TBN0 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
RAB3IL1Q8TBN0 HAUS4P1-201ENST00000406739 1145 ntBASIC16.1■□□□□ 0.17
RAB3IL1Q8TBN0 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RAB3IL1Q8TBN0 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.1■□□□□ 0.17
RAB3IL1Q8TBN0 DUSP5P1-201ENST00000441325 1139 ntBASIC16.1■□□□□ 0.17
RAB3IL1Q8TBN0 AC132008.2-207ENST00000454517 770 ntBASIC16.1■□□□□ 0.17
RAB3IL1Q8TBN0 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.1■□□□□ 0.17
RAB3IL1Q8TBN0 MIR3180-1-201ENST00000580374 94 ntBASIC16.1■□□□□ 0.17
RAB3IL1Q8TBN0 MIR3180-3-201ENST00000584616 94 ntBASIC16.1■□□□□ 0.17
RAB3IL1Q8TBN0 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.1■□□□□ 0.17
RAB3IL1Q8TBN0 AL121894.2-201ENST00000602977 491 ntBASIC16.1■□□□□ 0.17
RAB3IL1Q8TBN0 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RAB3IL1Q8TBN0 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.1■□□□□ 0.17
RAB3IL1Q8TBN0 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.1■□□□□ 0.17
RAB3IL1Q8TBN0 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
RAB3IL1Q8TBN0 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RAB3IL1Q8TBN0 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB3IL1Q8TBN0 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB3IL1Q8TBN0 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.1■□□□□ 0.17
RAB3IL1Q8TBN0 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC16.1■□□□□ 0.17
RAB3IL1Q8TBN0 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
RAB3IL1Q8TBN0 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
RAB3IL1Q8TBN0 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB3IL1Q8TBN0 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.09■□□□□ 0.17
RAB3IL1Q8TBN0 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.09■□□□□ 0.17
RAB3IL1Q8TBN0 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.09■□□□□ 0.17
RAB3IL1Q8TBN0 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
RAB3IL1Q8TBN0 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB3IL1Q8TBN0 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms