Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
SHKBP1Q8TBC3 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SHKBP1Q8TBC3 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHKBP1Q8TBC3 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHKBP1Q8TBC3 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.87■□□□□ 0.29
SHKBP1Q8TBC3 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SHKBP1Q8TBC3 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.87■□□□□ 0.29
SHKBP1Q8TBC3 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SHKBP1Q8TBC3 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SHKBP1Q8TBC3 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHKBP1Q8TBC3 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHKBP1Q8TBC3 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.86■□□□□ 0.29
SHKBP1Q8TBC3 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHKBP1Q8TBC3 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.86■□□□□ 0.29
SHKBP1Q8TBC3 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.86■□□□□ 0.29
SHKBP1Q8TBC3 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SHKBP1Q8TBC3 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.86■□□□□ 0.29
SHKBP1Q8TBC3 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHKBP1Q8TBC3 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SHKBP1Q8TBC3 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.86■□□□□ 0.29
SHKBP1Q8TBC3 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHKBP1Q8TBC3 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHKBP1Q8TBC3 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.86■□□□□ 0.29
SHKBP1Q8TBC3 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHKBP1Q8TBC3 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.86■□□□□ 0.29
SHKBP1Q8TBC3 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
SHKBP1Q8TBC3 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.86■□□□□ 0.29
SHKBP1Q8TBC3 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHKBP1Q8TBC3 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.86■□□□□ 0.29
SHKBP1Q8TBC3 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.29
SHKBP1Q8TBC3 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
SHKBP1Q8TBC3 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SHKBP1Q8TBC3 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.86■□□□□ 0.29
SHKBP1Q8TBC3 INE1-201ENST00000456273 945 ntBASIC16.86■□□□□ 0.29
SHKBP1Q8TBC3 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.86■□□□□ 0.29
SHKBP1Q8TBC3 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.86■□□□□ 0.29
SHKBP1Q8TBC3 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SHKBP1Q8TBC3 NOP2-220ENST00000545915 630 ntTSL 2 BASIC16.86■□□□□ 0.29
SHKBP1Q8TBC3 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SHKBP1Q8TBC3 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHKBP1Q8TBC3 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.86■□□□□ 0.29
SHKBP1Q8TBC3 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.86■□□□□ 0.29
SHKBP1Q8TBC3 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.86■□□□□ 0.29
SHKBP1Q8TBC3 MIR4321-201ENST00000592276 80 ntBASIC16.86■□□□□ 0.29
SHKBP1Q8TBC3 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.86■□□□□ 0.29
SHKBP1Q8TBC3 AL136982.4-201ENST00000437689 1740 ntBASIC16.86■□□□□ 0.29
SHKBP1Q8TBC3 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHKBP1Q8TBC3 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SHKBP1Q8TBC3 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHKBP1Q8TBC3 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHKBP1Q8TBC3 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SHKBP1Q8TBC3 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
SHKBP1Q8TBC3 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.86■□□□□ 0.29
SHKBP1Q8TBC3 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHKBP1Q8TBC3 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.86■□□□□ 0.29
SHKBP1Q8TBC3 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SHKBP1Q8TBC3 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.86■□□□□ 0.29
SHKBP1Q8TBC3 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.86■□□□□ 0.29
SHKBP1Q8TBC3 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SHKBP1Q8TBC3 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHKBP1Q8TBC3 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SHKBP1Q8TBC3 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SHKBP1Q8TBC3 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHKBP1Q8TBC3 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SHKBP1Q8TBC3 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
SHKBP1Q8TBC3 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SHKBP1Q8TBC3 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SHKBP1Q8TBC3 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHKBP1Q8TBC3 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHKBP1Q8TBC3 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SHKBP1Q8TBC3 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHKBP1Q8TBC3 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
SHKBP1Q8TBC3 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHKBP1Q8TBC3 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
SHKBP1Q8TBC3 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.85■□□□□ 0.29
SHKBP1Q8TBC3 HLA-A-202ENST00000376806 1854 ntBASIC16.85■□□□□ 0.29
SHKBP1Q8TBC3 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHKBP1Q8TBC3 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.85■□□□□ 0.29
SHKBP1Q8TBC3 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.85■□□□□ 0.29
SHKBP1Q8TBC3 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHKBP1Q8TBC3 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.85■□□□□ 0.29
SHKBP1Q8TBC3 AP006294.1-201ENST00000415407 339 ntBASIC16.85■□□□□ 0.29
SHKBP1Q8TBC3 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.85■□□□□ 0.29
SHKBP1Q8TBC3 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.85■□□□□ 0.29
SHKBP1Q8TBC3 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHKBP1Q8TBC3 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.85■□□□□ 0.29
SHKBP1Q8TBC3 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SHKBP1Q8TBC3 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHKBP1Q8TBC3 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.85■□□□□ 0.29
SHKBP1Q8TBC3 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.85■□□□□ 0.29
SHKBP1Q8TBC3 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.85■□□□□ 0.29
SHKBP1Q8TBC3 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
SHKBP1Q8TBC3 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SHKBP1Q8TBC3 AC055876.2-201ENST00000531834 546 ntBASIC16.85■□□□□ 0.29
SHKBP1Q8TBC3 TPRX2P-201ENST00000535362 881 ntBASIC16.85■□□□□ 0.29
SHKBP1Q8TBC3 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SHKBP1Q8TBC3 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.85■□□□□ 0.29
SHKBP1Q8TBC3 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.85■□□□□ 0.29
SHKBP1Q8TBC3 AC023310.3-201ENST00000557027 670 ntBASIC16.85■□□□□ 0.29
SHKBP1Q8TBC3 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms