Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 TKT-201ENST00000296289 1931 ntTSL 5 BASIC9.85□□□□□ -0.83
SVIPQ8NHG7 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
SVIPQ8NHG7 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
SVIPQ8NHG7 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
SVIPQ8NHG7 CEP78-205ENST00000424347 11198 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
SVIPQ8NHG7 CHTF8-201ENST00000306585 2561 ntBASIC9.85□□□□□ -0.83
SVIPQ8NHG7 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
SVIPQ8NHG7 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
SVIPQ8NHG7 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC9.85□□□□□ -0.83
SVIPQ8NHG7 SEC23B-201ENST00000262544 3176 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
SVIPQ8NHG7 TAS1R2-201ENST00000375371 2542 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
SVIPQ8NHG7 SCRN3-201ENST00000272732 3037 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
SVIPQ8NHG7 OTUD6B-206ENST00000617869 3294 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
SVIPQ8NHG7 AC008966.1-201ENST00000502171 2367 ntTSL 2 BASIC9.85□□□□□ -0.83
SVIPQ8NHG7 FLII-221ENST00000578558 2377 ntTSL 5 BASIC9.85□□□□□ -0.83
SVIPQ8NHG7 EXOC5-202ENST00000413566 8513 ntTSL 5 BASIC9.85□□□□□ -0.83
SVIPQ8NHG7 PTPRG-201ENST00000295874 4650 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
SVIPQ8NHG7 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
SVIPQ8NHG7 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC9.85□□□□□ -0.83
SVIPQ8NHG7 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
SVIPQ8NHG7 MYEF2-216ENST00000616409 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
SVIPQ8NHG7 MX1-218ENST00000619682 1980 ntTSL 5 BASIC9.84□□□□□ -0.83
SVIPQ8NHG7 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SVIPQ8NHG7 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
SVIPQ8NHG7 ABL2-204ENST00000502732 12144 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
SVIPQ8NHG7 AC104825.2-201ENST00000505448 3249 ntBASIC9.84□□□□□ -0.83
SVIPQ8NHG7 RASGRP4-217ENST00000615439 3217 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SVIPQ8NHG7 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
SVIPQ8NHG7 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC9.84□□□□□ -0.83
SVIPQ8NHG7 BX119927.1-201ENST00000636596 1552 ntBASIC9.84□□□□□ -0.83
SVIPQ8NHG7 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
SVIPQ8NHG7 DPF2-202ENST00000415073 2085 ntTSL 2 BASIC9.84□□□□□ -0.83
SVIPQ8NHG7 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC9.84□□□□□ -0.83
SVIPQ8NHG7 SLC44A2-202ENST00000407327 3301 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
SVIPQ8NHG7 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SVIPQ8NHG7 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SVIPQ8NHG7 ZNF483-203ENST00000358151 2433 ntTSL 2 BASIC9.84□□□□□ -0.83
SVIPQ8NHG7 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC9.84□□□□□ -0.83
SVIPQ8NHG7 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SVIPQ8NHG7 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC9.84□□□□□ -0.83
SVIPQ8NHG7 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC9.84□□□□□ -0.83
SVIPQ8NHG7 PLB1-201ENST00000327757 5107 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
SVIPQ8NHG7 NEFM-204ENST00000518131 2500 ntAPPRIS ALT2 TSL 2 BASIC9.84□□□□□ -0.83
SVIPQ8NHG7 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SVIPQ8NHG7 YIPF5-202ENST00000448443 2255 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SVIPQ8NHG7 STK40-203ENST00000373130 3628 ntAPPRIS ALT1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SVIPQ8NHG7 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
SVIPQ8NHG7 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SVIPQ8NHG7 NLRX1-214ENST00000525863 2850 ntTSL 5 BASIC9.84□□□□□ -0.83
SVIPQ8NHG7 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC9.84□□□□□ -0.83
SVIPQ8NHG7 RSPH10B2-202ENST00000403107 3220 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SVIPQ8NHG7 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC9.84□□□□□ -0.83
SVIPQ8NHG7 AC233699.1-201ENST00000569955 1168 ntBASIC9.84□□□□□ -0.83
SVIPQ8NHG7 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC9.84□□□□□ -0.83
SVIPQ8NHG7 AC018755.3-202ENST00000596210 929 ntBASIC9.84□□□□□ -0.83
SVIPQ8NHG7 AL157888.1-201ENST00000631930 593 ntBASIC9.84□□□□□ -0.83
SVIPQ8NHG7 AC022400.8-201ENST00000623453 3599 ntBASIC9.84□□□□□ -0.83
SVIPQ8NHG7 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SVIPQ8NHG7 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
SVIPQ8NHG7 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC9.84□□□□□ -0.83
SVIPQ8NHG7 LPIN1-209ENST00000449576 3077 ntTSL 2 BASIC9.84□□□□□ -0.83
SVIPQ8NHG7 ZNF559-213ENST00000603380 3054 ntAPPRIS P3 TSL 2 BASIC9.84□□□□□ -0.83
SVIPQ8NHG7 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
SVIPQ8NHG7 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC9.84□□□□□ -0.83
SVIPQ8NHG7 PTBP1P-201ENST00000554374 1601 ntBASIC9.84□□□□□ -0.83
SVIPQ8NHG7 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SVIPQ8NHG7 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
SVIPQ8NHG7 USO1-201ENST00000264904 4135 ntTSL 2 BASIC9.84□□□□□ -0.83
SVIPQ8NHG7 EPHA5-206ENST00000622150 8421 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
SVIPQ8NHG7 LINC01391-203ENST00000495287 3538 ntTSL 2 BASIC9.84□□□□□ -0.83
SVIPQ8NHG7 MAP3K9-202ENST00000553414 3544 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
SVIPQ8NHG7 FLJ40194-201ENST00000322227 2317 ntTSL 2 BASIC9.84□□□□□ -0.83
SVIPQ8NHG7 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SVIPQ8NHG7 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC9.84□□□□□ -0.83
SVIPQ8NHG7 TXLNG-202ENST00000398155 3998 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
SVIPQ8NHG7 AC103764.1-201ENST00000505083 2096 ntTSL 2 BASIC9.84□□□□□ -0.83
SVIPQ8NHG7 AP002761.4-201ENST00000565433 3361 ntBASIC9.84□□□□□ -0.83
SVIPQ8NHG7 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SVIPQ8NHG7 DFFB-201ENST00000338895 3105 ntTSL 2 BASIC9.84□□□□□ -0.83
SVIPQ8NHG7 EXOC7-216ENST00000589210 4751 ntAPPRIS ALT1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SVIPQ8NHG7 NCAPD2P1-201ENST00000432906 1801 ntBASIC9.84□□□□□ -0.83
SVIPQ8NHG7 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC9.84□□□□□ -0.83
SVIPQ8NHG7 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SVIPQ8NHG7 TCN2-201ENST00000215838 2535 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
SVIPQ8NHG7 SHC1-203ENST00000368449 2879 ntTSL 5 BASIC9.84□□□□□ -0.83
SVIPQ8NHG7 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
SVIPQ8NHG7 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC9.84□□□□□ -0.83
SVIPQ8NHG7 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
SVIPQ8NHG7 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
SVIPQ8NHG7 SLC26A6-203ENST00000358747 2729 ntTSL 1 (best) BASIC9.84□□□□□ -0.84
SVIPQ8NHG7 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC9.83□□□□□ -0.84
SVIPQ8NHG7 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC9.83□□□□□ -0.84
SVIPQ8NHG7 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
SVIPQ8NHG7 TUBD1-205ENST00000394239 1680 ntTSL 2 BASIC9.83□□□□□ -0.84
SVIPQ8NHG7 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
SVIPQ8NHG7 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC9.83□□□□□ -0.84
SVIPQ8NHG7 SEPT2-204ENST00000391973 3701 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SVIPQ8NHG7 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SVIPQ8NHG7 POLR1E-201ENST00000377792 2229 ntTSL 2 BASIC9.83□□□□□ -0.84
SVIPQ8NHG7 MTHFR-205ENST00000376592 8378 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms