Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LSMEM1Q8N8F7 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LSMEM1Q8N8F7 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LSMEM1Q8N8F7 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LSMEM1Q8N8F7 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
LSMEM1Q8N8F7 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LSMEM1Q8N8F7 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.78□□□□□ -0.04
LSMEM1Q8N8F7 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LSMEM1Q8N8F7 AC138035.3-201ENST00000622706 2791 ntBASIC14.78□□□□□ -0.04
LSMEM1Q8N8F7 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
LSMEM1Q8N8F7 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LSMEM1Q8N8F7 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
LSMEM1Q8N8F7 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
LSMEM1Q8N8F7 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.78□□□□□ -0.04
LSMEM1Q8N8F7 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.78□□□□□ -0.04
LSMEM1Q8N8F7 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.78□□□□□ -0.04
LSMEM1Q8N8F7 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.78□□□□□ -0.04
LSMEM1Q8N8F7 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.78□□□□□ -0.04
LSMEM1Q8N8F7 AC024267.1-201ENST00000582320 895 ntBASIC14.78□□□□□ -0.04
LSMEM1Q8N8F7 SPTSSB-204ENST00000617024 1292 ntBASIC14.78□□□□□ -0.04
LSMEM1Q8N8F7 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LSMEM1Q8N8F7 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
LSMEM1Q8N8F7 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LSMEM1Q8N8F7 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.78□□□□□ -0.04
LSMEM1Q8N8F7 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.78□□□□□ -0.04
LSMEM1Q8N8F7 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.78□□□□□ -0.04
LSMEM1Q8N8F7 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.78□□□□□ -0.04
LSMEM1Q8N8F7 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LSMEM1Q8N8F7 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.78□□□□□ -0.04
LSMEM1Q8N8F7 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LSMEM1Q8N8F7 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.78□□□□□ -0.04
LSMEM1Q8N8F7 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
LSMEM1Q8N8F7 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
LSMEM1Q8N8F7 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
LSMEM1Q8N8F7 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LSMEM1Q8N8F7 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LSMEM1Q8N8F7 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LSMEM1Q8N8F7 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LSMEM1Q8N8F7 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.77□□□□□ -0.04
LSMEM1Q8N8F7 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
LSMEM1Q8N8F7 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LSMEM1Q8N8F7 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.77□□□□□ -0.04
LSMEM1Q8N8F7 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
LSMEM1Q8N8F7 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
LSMEM1Q8N8F7 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LSMEM1Q8N8F7 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.77□□□□□ -0.04
LSMEM1Q8N8F7 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LSMEM1Q8N8F7 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
LSMEM1Q8N8F7 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LSMEM1Q8N8F7 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LSMEM1Q8N8F7 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.77□□□□□ -0.05
LSMEM1Q8N8F7 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.05
LSMEM1Q8N8F7 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LSMEM1Q8N8F7 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.77□□□□□ -0.05
LSMEM1Q8N8F7 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LSMEM1Q8N8F7 TFAMP1-201ENST00000412727 736 ntBASIC14.77□□□□□ -0.05
LSMEM1Q8N8F7 MCCD1P2-201ENST00000423228 335 ntBASIC14.77□□□□□ -0.05
LSMEM1Q8N8F7 ADH5P3-201ENST00000433842 1137 ntBASIC14.77□□□□□ -0.05
LSMEM1Q8N8F7 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.77□□□□□ -0.05
LSMEM1Q8N8F7 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LSMEM1Q8N8F7 RN7SL589P-201ENST00000481268 310 ntBASIC14.77□□□□□ -0.05
LSMEM1Q8N8F7 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.77□□□□□ -0.05
LSMEM1Q8N8F7 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.77□□□□□ -0.05
LSMEM1Q8N8F7 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LSMEM1Q8N8F7 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.77□□□□□ -0.05
LSMEM1Q8N8F7 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.77□□□□□ -0.05
LSMEM1Q8N8F7 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.77□□□□□ -0.05
LSMEM1Q8N8F7 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LSMEM1Q8N8F7 AL135744.1-201ENST00000565098 629 ntBASIC14.77□□□□□ -0.05
LSMEM1Q8N8F7 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.77□□□□□ -0.05
LSMEM1Q8N8F7 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.77□□□□□ -0.05
LSMEM1Q8N8F7 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.77□□□□□ -0.05
LSMEM1Q8N8F7 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.77□□□□□ -0.05
LSMEM1Q8N8F7 AC092902.6-201ENST00000641783 218 ntBASIC14.77□□□□□ -0.05
LSMEM1Q8N8F7 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.77□□□□□ -0.05
LSMEM1Q8N8F7 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
LSMEM1Q8N8F7 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
LSMEM1Q8N8F7 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.77□□□□□ -0.05
LSMEM1Q8N8F7 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
LSMEM1Q8N8F7 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
LSMEM1Q8N8F7 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LSMEM1Q8N8F7 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
LSMEM1Q8N8F7 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LSMEM1Q8N8F7 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
LSMEM1Q8N8F7 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LSMEM1Q8N8F7 FOXO1B-201ENST00000504678 1527 ntBASIC14.76□□□□□ -0.05
LSMEM1Q8N8F7 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LSMEM1Q8N8F7 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.76□□□□□ -0.05
LSMEM1Q8N8F7 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.76□□□□□ -0.05
LSMEM1Q8N8F7 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LSMEM1Q8N8F7 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
LSMEM1Q8N8F7 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
LSMEM1Q8N8F7 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LSMEM1Q8N8F7 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LSMEM1Q8N8F7 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
LSMEM1Q8N8F7 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LSMEM1Q8N8F7 TNRC18P2-201ENST00000417666 2714 ntBASIC14.76□□□□□ -0.05
LSMEM1Q8N8F7 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LSMEM1Q8N8F7 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
LSMEM1Q8N8F7 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms