Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
BEST3Q8N1M1 AL080243.2-201ENST00000418783 582 ntBASIC14.97□□□□□ -0.01
BEST3Q8N1M1 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
BEST3Q8N1M1 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BEST3Q8N1M1 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BEST3Q8N1M1 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
BEST3Q8N1M1 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.97□□□□□ -0.01
BEST3Q8N1M1 AC009118.2-201ENST00000613275 655 ntBASIC14.97□□□□□ -0.01
BEST3Q8N1M1 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BEST3Q8N1M1 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BEST3Q8N1M1 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
BEST3Q8N1M1 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
BEST3Q8N1M1 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
BEST3Q8N1M1 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
BEST3Q8N1M1 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
BEST3Q8N1M1 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
BEST3Q8N1M1 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BEST3Q8N1M1 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BEST3Q8N1M1 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BEST3Q8N1M1 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
BEST3Q8N1M1 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.97□□□□□ -0.01
BEST3Q8N1M1 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.97□□□□□ -0.01
BEST3Q8N1M1 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
BEST3Q8N1M1 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.97□□□□□ -0.01
BEST3Q8N1M1 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.97□□□□□ -0.01
BEST3Q8N1M1 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
BEST3Q8N1M1 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.96□□□□□ -0.01
BEST3Q8N1M1 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.96□□□□□ -0.01
BEST3Q8N1M1 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
BEST3Q8N1M1 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
BEST3Q8N1M1 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
BEST3Q8N1M1 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
BEST3Q8N1M1 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
BEST3Q8N1M1 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
BEST3Q8N1M1 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.96□□□□□ -0.01
BEST3Q8N1M1 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
BEST3Q8N1M1 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
BEST3Q8N1M1 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
BEST3Q8N1M1 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
BEST3Q8N1M1 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
BEST3Q8N1M1 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
BEST3Q8N1M1 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
BEST3Q8N1M1 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
BEST3Q8N1M1 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.96□□□□□ -0.01
BEST3Q8N1M1 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.96□□□□□ -0.01
BEST3Q8N1M1 AC015922.1-201ENST00000421102 1152 ntBASIC14.96□□□□□ -0.01
BEST3Q8N1M1 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.96□□□□□ -0.01
BEST3Q8N1M1 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
BEST3Q8N1M1 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
BEST3Q8N1M1 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.96□□□□□ -0.01
BEST3Q8N1M1 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.96□□□□□ -0.01
BEST3Q8N1M1 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.96□□□□□ -0.01
BEST3Q8N1M1 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.96□□□□□ -0.01
BEST3Q8N1M1 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.96□□□□□ -0.01
BEST3Q8N1M1 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.96□□□□□ -0.01
BEST3Q8N1M1 AC026979.3-201ENST00000607315 403 ntBASIC14.96□□□□□ -0.01
BEST3Q8N1M1 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.96□□□□□ -0.01
BEST3Q8N1M1 AL844908.2-201ENST00000609461 460 ntBASIC14.96□□□□□ -0.01
BEST3Q8N1M1 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
BEST3Q8N1M1 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.96□□□□□ -0.01
BEST3Q8N1M1 HYMAI-201ENST00000635591 3347 ntBASIC14.96□□□□□ -0.01
BEST3Q8N1M1 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
BEST3Q8N1M1 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
BEST3Q8N1M1 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
BEST3Q8N1M1 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
BEST3Q8N1M1 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
BEST3Q8N1M1 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.96□□□□□ -0.01
BEST3Q8N1M1 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
BEST3Q8N1M1 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
BEST3Q8N1M1 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
BEST3Q8N1M1 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
BEST3Q8N1M1 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
BEST3Q8N1M1 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.96□□□□□ -0.02
BEST3Q8N1M1 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.96□□□□□ -0.02
BEST3Q8N1M1 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
BEST3Q8N1M1 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.02
BEST3Q8N1M1 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.96□□□□□ -0.02
BEST3Q8N1M1 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
BEST3Q8N1M1 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.95□□□□□ -0.02
BEST3Q8N1M1 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.95□□□□□ -0.02
BEST3Q8N1M1 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.95□□□□□ -0.02
BEST3Q8N1M1 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.95□□□□□ -0.02
BEST3Q8N1M1 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.95□□□□□ -0.02
BEST3Q8N1M1 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
BEST3Q8N1M1 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.95□□□□□ -0.02
BEST3Q8N1M1 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
BEST3Q8N1M1 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.95□□□□□ -0.02
BEST3Q8N1M1 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
BEST3Q8N1M1 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
BEST3Q8N1M1 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
BEST3Q8N1M1 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
BEST3Q8N1M1 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
BEST3Q8N1M1 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
BEST3Q8N1M1 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.95□□□□□ -0.02
BEST3Q8N1M1 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.95□□□□□ -0.02
BEST3Q8N1M1 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
BEST3Q8N1M1 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
BEST3Q8N1M1 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
BEST3Q8N1M1 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.95□□□□□ -0.02
BEST3Q8N1M1 AC009477.1-201ENST00000452936 217 ntBASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms