Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM42Q8IWZ5 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM42Q8IWZ5 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM42Q8IWZ5 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.14■□□□□ 0.17
TRIM42Q8IWZ5 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM42Q8IWZ5 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM42Q8IWZ5 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.14■□□□□ 0.17
TRIM42Q8IWZ5 AC107918.2-201ENST00000530817 355 ntBASIC16.14■□□□□ 0.17
TRIM42Q8IWZ5 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.14■□□□□ 0.17
TRIM42Q8IWZ5 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC16.14■□□□□ 0.17
TRIM42Q8IWZ5 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.14■□□□□ 0.17
TRIM42Q8IWZ5 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM42Q8IWZ5 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.14■□□□□ 0.17
TRIM42Q8IWZ5 AP001269.4-201ENST00000609611 512 ntBASIC16.14■□□□□ 0.17
TRIM42Q8IWZ5 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.14■□□□□ 0.17
TRIM42Q8IWZ5 AC004706.3-202ENST00000621574 984 ntBASIC16.14■□□□□ 0.17
TRIM42Q8IWZ5 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TRIM42Q8IWZ5 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM42Q8IWZ5 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM42Q8IWZ5 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.14■□□□□ 0.17
TRIM42Q8IWZ5 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM42Q8IWZ5 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TRIM42Q8IWZ5 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.14■□□□□ 0.17
TRIM42Q8IWZ5 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM42Q8IWZ5 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM42Q8IWZ5 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16.14■□□□□ 0.17
TRIM42Q8IWZ5 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TRIM42Q8IWZ5 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM42Q8IWZ5 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.14■□□□□ 0.17
TRIM42Q8IWZ5 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM42Q8IWZ5 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.14■□□□□ 0.17
TRIM42Q8IWZ5 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM42Q8IWZ5 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM42Q8IWZ5 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM42Q8IWZ5 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM42Q8IWZ5 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.13■□□□□ 0.17
TRIM42Q8IWZ5 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.13■□□□□ 0.17
TRIM42Q8IWZ5 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TRIM42Q8IWZ5 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.13■□□□□ 0.17
TRIM42Q8IWZ5 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM42Q8IWZ5 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM42Q8IWZ5 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.13■□□□□ 0.17
TRIM42Q8IWZ5 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM42Q8IWZ5 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM42Q8IWZ5 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC16.13■□□□□ 0.17
TRIM42Q8IWZ5 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM42Q8IWZ5 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM42Q8IWZ5 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM42Q8IWZ5 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM42Q8IWZ5 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM42Q8IWZ5 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.13■□□□□ 0.17
TRIM42Q8IWZ5 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM42Q8IWZ5 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.13■□□□□ 0.17
TRIM42Q8IWZ5 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.13■□□□□ 0.17
TRIM42Q8IWZ5 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.13■□□□□ 0.17
TRIM42Q8IWZ5 AC106795.1-205ENST00000512851 1056 ntBASIC16.13■□□□□ 0.17
TRIM42Q8IWZ5 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.13■□□□□ 0.17
TRIM42Q8IWZ5 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.13■□□□□ 0.17
TRIM42Q8IWZ5 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.13■□□□□ 0.17
TRIM42Q8IWZ5 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM42Q8IWZ5 AL805961.1-202ENST00000641562 540 ntBASIC16.13■□□□□ 0.17
TRIM42Q8IWZ5 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM42Q8IWZ5 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM42Q8IWZ5 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.13■□□□□ 0.17
TRIM42Q8IWZ5 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
TRIM42Q8IWZ5 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM42Q8IWZ5 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
TRIM42Q8IWZ5 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM42Q8IWZ5 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM42Q8IWZ5 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM42Q8IWZ5 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM42Q8IWZ5 AP002414.2-201ENST00000591780 3365 ntBASIC16.13■□□□□ 0.17
TRIM42Q8IWZ5 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.13■□□□□ 0.17
TRIM42Q8IWZ5 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM42Q8IWZ5 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM42Q8IWZ5 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.13■□□□□ 0.17
TRIM42Q8IWZ5 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TRIM42Q8IWZ5 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM42Q8IWZ5 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM42Q8IWZ5 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM42Q8IWZ5 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM42Q8IWZ5 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.12■□□□□ 0.17
TRIM42Q8IWZ5 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM42Q8IWZ5 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.12■□□□□ 0.17
TRIM42Q8IWZ5 AC004870.1-201ENST00000315132 882 ntBASIC16.12■□□□□ 0.17
TRIM42Q8IWZ5 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM42Q8IWZ5 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.12■□□□□ 0.17
TRIM42Q8IWZ5 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.12■□□□□ 0.17
TRIM42Q8IWZ5 RBM17P3-201ENST00000417687 1192 ntBASIC16.12■□□□□ 0.17
TRIM42Q8IWZ5 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.12■□□□□ 0.17
TRIM42Q8IWZ5 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.12■□□□□ 0.17
TRIM42Q8IWZ5 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM42Q8IWZ5 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM42Q8IWZ5 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.12■□□□□ 0.17
TRIM42Q8IWZ5 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.12■□□□□ 0.17
TRIM42Q8IWZ5 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TRIM42Q8IWZ5 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM42Q8IWZ5 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.12■□□□□ 0.17
TRIM42Q8IWZ5 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM42Q8IWZ5 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms