Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 HIST2H2BB-201ENST00000449108 381 ntBASIC22.29■■□□□ 1.16
UBR1Q8IWV7 AL391280.1-201ENST00000506969 1062 ntBASIC22.29■■□□□ 1.16
UBR1Q8IWV7 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC22.29■■□□□ 1.16
UBR1Q8IWV7 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC22.29■■□□□ 1.16
UBR1Q8IWV7 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
UBR1Q8IWV7 AC026740.1-201ENST00000607068 791 ntBASIC22.29■■□□□ 1.16
UBR1Q8IWV7 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
UBR1Q8IWV7 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
UBR1Q8IWV7 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
UBR1Q8IWV7 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC22.29■■□□□ 1.16
UBR1Q8IWV7 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
UBR1Q8IWV7 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
UBR1Q8IWV7 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
UBR1Q8IWV7 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC22.29■■□□□ 1.16
UBR1Q8IWV7 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC22.29■■□□□ 1.16
UBR1Q8IWV7 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC22.29■■□□□ 1.16
UBR1Q8IWV7 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
UBR1Q8IWV7 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
UBR1Q8IWV7 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
UBR1Q8IWV7 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
UBR1Q8IWV7 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
UBR1Q8IWV7 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC22.28■■□□□ 1.16
UBR1Q8IWV7 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
UBR1Q8IWV7 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC22.28■■□□□ 1.16
UBR1Q8IWV7 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
UBR1Q8IWV7 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
UBR1Q8IWV7 PRKXP1-201ENST00000561423 1122 ntBASIC22.28■■□□□ 1.16
UBR1Q8IWV7 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC22.28■■□□□ 1.16
UBR1Q8IWV7 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC22.28■■□□□ 1.16
UBR1Q8IWV7 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC22.28■■□□□ 1.16
UBR1Q8IWV7 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC22.28■■□□□ 1.16
UBR1Q8IWV7 CU633904.3-201ENST00000624042 1029 ntBASIC22.28■■□□□ 1.16
UBR1Q8IWV7 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC22.28■■□□□ 1.16
UBR1Q8IWV7 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
UBR1Q8IWV7 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
UBR1Q8IWV7 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
UBR1Q8IWV7 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
UBR1Q8IWV7 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
UBR1Q8IWV7 MAGEA5-201ENST00000446757 942 ntBASIC22.28■■□□□ 1.16
UBR1Q8IWV7 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
UBR1Q8IWV7 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC22.28■■□□□ 1.16
UBR1Q8IWV7 AC008267.1-201ENST00000474858 1069 ntBASIC22.28■■□□□ 1.16
UBR1Q8IWV7 COX5BP1-201ENST00000507622 393 ntBASIC22.28■■□□□ 1.16
UBR1Q8IWV7 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
UBR1Q8IWV7 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
UBR1Q8IWV7 ZACNP1-201ENST00000612259 710 ntBASIC22.28■■□□□ 1.16
UBR1Q8IWV7 AC022748.3-201ENST00000621828 275 ntBASIC22.28■■□□□ 1.16
UBR1Q8IWV7 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC22.28■■□□□ 1.16
UBR1Q8IWV7 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
UBR1Q8IWV7 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC22.28■■□□□ 1.16
UBR1Q8IWV7 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
UBR1Q8IWV7 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
UBR1Q8IWV7 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
UBR1Q8IWV7 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
UBR1Q8IWV7 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC22.27■■□□□ 1.16
UBR1Q8IWV7 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
UBR1Q8IWV7 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
UBR1Q8IWV7 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
UBR1Q8IWV7 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
UBR1Q8IWV7 AC018892.3-201ENST00000623986 2499 ntBASIC22.27■■□□□ 1.16
UBR1Q8IWV7 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
UBR1Q8IWV7 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
UBR1Q8IWV7 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
UBR1Q8IWV7 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
UBR1Q8IWV7 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
UBR1Q8IWV7 EHF-205ENST00000527935 557 ntTSL 2 BASIC22.27■■□□□ 1.16
UBR1Q8IWV7 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC22.27■■□□□ 1.16
UBR1Q8IWV7 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.16
UBR1Q8IWV7 AC244157.2-201ENST00000616239 1006 ntBASIC22.27■■□□□ 1.16
UBR1Q8IWV7 AP001002.3-201ENST00000623482 206 ntBASIC22.27■■□□□ 1.16
UBR1Q8IWV7 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC22.27■■□□□ 1.16
UBR1Q8IWV7 PRSS30P-206ENST00000641773 873 ntBASIC22.27■■□□□ 1.16
UBR1Q8IWV7 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
UBR1Q8IWV7 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
UBR1Q8IWV7 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
UBR1Q8IWV7 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
UBR1Q8IWV7 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC22.27■■□□□ 1.16
UBR1Q8IWV7 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC22.27■■□□□ 1.16
UBR1Q8IWV7 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
UBR1Q8IWV7 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
UBR1Q8IWV7 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
UBR1Q8IWV7 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
UBR1Q8IWV7 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
UBR1Q8IWV7 AC022188.1-201ENST00000620960 1664 ntBASIC22.26■■□□□ 1.15
UBR1Q8IWV7 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC22.26■■□□□ 1.15
UBR1Q8IWV7 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
UBR1Q8IWV7 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
UBR1Q8IWV7 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC22.26■■□□□ 1.15
UBR1Q8IWV7 AC024681.1-201ENST00000521917 487 ntBASIC22.26■■□□□ 1.15
UBR1Q8IWV7 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC22.26■■□□□ 1.15
UBR1Q8IWV7 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC22.26■■□□□ 1.15
UBR1Q8IWV7 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
UBR1Q8IWV7 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
UBR1Q8IWV7 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
UBR1Q8IWV7 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
UBR1Q8IWV7 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
UBR1Q8IWV7 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC22.26■■□□□ 1.15
UBR1Q8IWV7 AC120498.9-201ENST00000339021 3867 ntBASIC22.26■■□□□ 1.15
UBR1Q8IWV7 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC22.26■■□□□ 1.15
UBR1Q8IWV7 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms