Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.9□□□□□ -0.02
VRK2Q86Y07 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
VRK2Q86Y07 AC011477.6-201ENST00000604980 1927 ntBASIC14.9□□□□□ -0.02
VRK2Q86Y07 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
VRK2Q86Y07 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.9□□□□□ -0.02
VRK2Q86Y07 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VRK2Q86Y07 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
VRK2Q86Y07 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VRK2Q86Y07 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VRK2Q86Y07 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.89□□□□□ -0.03
VRK2Q86Y07 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VRK2Q86Y07 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VRK2Q86Y07 AP001282.1-201ENST00000531301 1499 ntBASIC14.89□□□□□ -0.03
VRK2Q86Y07 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.89□□□□□ -0.03
VRK2Q86Y07 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.89□□□□□ -0.03
VRK2Q86Y07 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
VRK2Q86Y07 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
VRK2Q86Y07 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
VRK2Q86Y07 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VRK2Q86Y07 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.89□□□□□ -0.03
VRK2Q86Y07 AC104640.1-201ENST00000562617 2109 ntBASIC14.89□□□□□ -0.03
VRK2Q86Y07 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.89□□□□□ -0.03
VRK2Q86Y07 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VRK2Q86Y07 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
VRK2Q86Y07 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VRK2Q86Y07 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.89□□□□□ -0.03
VRK2Q86Y07 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
VRK2Q86Y07 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.89□□□□□ -0.03
VRK2Q86Y07 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.89□□□□□ -0.03
VRK2Q86Y07 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VRK2Q86Y07 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.89□□□□□ -0.03
VRK2Q86Y07 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VRK2Q86Y07 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.89□□□□□ -0.03
VRK2Q86Y07 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VRK2Q86Y07 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
VRK2Q86Y07 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VRK2Q86Y07 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.89□□□□□ -0.03
VRK2Q86Y07 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.89□□□□□ -0.03
VRK2Q86Y07 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.89□□□□□ -0.03
VRK2Q86Y07 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.89□□□□□ -0.03
VRK2Q86Y07 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.89□□□□□ -0.03
VRK2Q86Y07 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.89□□□□□ -0.03
VRK2Q86Y07 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.89□□□□□ -0.03
VRK2Q86Y07 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
VRK2Q86Y07 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VRK2Q86Y07 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
VRK2Q86Y07 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VRK2Q86Y07 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
VRK2Q86Y07 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VRK2Q86Y07 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VRK2Q86Y07 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VRK2Q86Y07 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.89□□□□□ -0.03
VRK2Q86Y07 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.89□□□□□ -0.03
VRK2Q86Y07 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VRK2Q86Y07 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VRK2Q86Y07 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VRK2Q86Y07 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VRK2Q86Y07 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
VRK2Q86Y07 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VRK2Q86Y07 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VRK2Q86Y07 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VRK2Q86Y07 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
VRK2Q86Y07 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.88□□□□□ -0.03
VRK2Q86Y07 AC013268.4-201ENST00000637413 2228 ntBASIC14.88□□□□□ -0.03
VRK2Q86Y07 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.88□□□□□ -0.03
VRK2Q86Y07 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VRK2Q86Y07 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VRK2Q86Y07 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.88□□□□□ -0.03
VRK2Q86Y07 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
VRK2Q86Y07 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VRK2Q86Y07 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VRK2Q86Y07 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.88□□□□□ -0.03
VRK2Q86Y07 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.88□□□□□ -0.03
VRK2Q86Y07 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.88□□□□□ -0.03
VRK2Q86Y07 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.88□□□□□ -0.03
VRK2Q86Y07 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.88□□□□□ -0.03
VRK2Q86Y07 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.88□□□□□ -0.03
VRK2Q86Y07 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.88□□□□□ -0.03
VRK2Q86Y07 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.88□□□□□ -0.03
VRK2Q86Y07 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.88□□□□□ -0.03
VRK2Q86Y07 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.88□□□□□ -0.03
VRK2Q86Y07 AC061975.2-201ENST00000581722 295 ntBASIC14.88□□□□□ -0.03
VRK2Q86Y07 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.88□□□□□ -0.03
VRK2Q86Y07 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VRK2Q86Y07 AC008267.7-201ENST00000624570 1194 ntBASIC14.88□□□□□ -0.03
VRK2Q86Y07 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.88□□□□□ -0.03
VRK2Q86Y07 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.88□□□□□ -0.03
VRK2Q86Y07 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.88□□□□□ -0.03
VRK2Q86Y07 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
VRK2Q86Y07 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.88□□□□□ -0.03
VRK2Q86Y07 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
VRK2Q86Y07 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VRK2Q86Y07 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.88□□□□□ -0.03
VRK2Q86Y07 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VRK2Q86Y07 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
VRK2Q86Y07 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VRK2Q86Y07 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.88□□□□□ -0.03
VRK2Q86Y07 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VRK2Q86Y07 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.88□□□□□ -0.03
VRK2Q86Y07 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms