Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CTC1Q2NKJ3 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTC1Q2NKJ3 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.16■□□□□ 0.34
CTC1Q2NKJ3 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTC1Q2NKJ3 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
CTC1Q2NKJ3 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC17.16■□□□□ 0.34
CTC1Q2NKJ3 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CTC1Q2NKJ3 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CTC1Q2NKJ3 CDC14C-201ENST00000428251 1719 ntBASIC17.16■□□□□ 0.34
CTC1Q2NKJ3 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC17.16■□□□□ 0.34
CTC1Q2NKJ3 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CTC1Q2NKJ3 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTC1Q2NKJ3 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CTC1Q2NKJ3 AC092053.1-201ENST00000605787 1936 ntBASIC17.15■□□□□ 0.34
CTC1Q2NKJ3 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTC1Q2NKJ3 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTC1Q2NKJ3 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CTC1Q2NKJ3 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CTC1Q2NKJ3 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTC1Q2NKJ3 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTC1Q2NKJ3 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTC1Q2NKJ3 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTC1Q2NKJ3 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTC1Q2NKJ3 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTC1Q2NKJ3 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTC1Q2NKJ3 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.15■□□□□ 0.34
CTC1Q2NKJ3 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.15■□□□□ 0.34
CTC1Q2NKJ3 STX1A-203ENST00000395155 783 ntTSL 2 BASIC17.15■□□□□ 0.34
CTC1Q2NKJ3 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CTC1Q2NKJ3 HAUS4P1-201ENST00000406739 1145 ntBASIC17.15■□□□□ 0.34
CTC1Q2NKJ3 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.15■□□□□ 0.34
CTC1Q2NKJ3 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CTC1Q2NKJ3 KRT43P-201ENST00000434019 910 ntBASIC17.15■□□□□ 0.34
CTC1Q2NKJ3 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CTC1Q2NKJ3 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CTC1Q2NKJ3 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTC1Q2NKJ3 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.15■□□□□ 0.34
CTC1Q2NKJ3 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC17.15■□□□□ 0.34
CTC1Q2NKJ3 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.15■□□□□ 0.34
CTC1Q2NKJ3 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CTC1Q2NKJ3 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC17.15■□□□□ 0.34
CTC1Q2NKJ3 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTC1Q2NKJ3 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTC1Q2NKJ3 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC17.15■□□□□ 0.34
CTC1Q2NKJ3 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC17.15■□□□□ 0.34
CTC1Q2NKJ3 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC17.15■□□□□ 0.34
CTC1Q2NKJ3 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.15■□□□□ 0.34
CTC1Q2NKJ3 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC17.15■□□□□ 0.34
CTC1Q2NKJ3 AC010319.3-201ENST00000597028 470 ntBASIC17.15■□□□□ 0.34
CTC1Q2NKJ3 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC17.15■□□□□ 0.34
CTC1Q2NKJ3 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTC1Q2NKJ3 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.15■□□□□ 0.34
CTC1Q2NKJ3 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTC1Q2NKJ3 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CTC1Q2NKJ3 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTC1Q2NKJ3 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTC1Q2NKJ3 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CTC1Q2NKJ3 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTC1Q2NKJ3 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CTC1Q2NKJ3 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTC1Q2NKJ3 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
CTC1Q2NKJ3 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.15■□□□□ 0.34
CTC1Q2NKJ3 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTC1Q2NKJ3 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC17.15■□□□□ 0.34
CTC1Q2NKJ3 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTC1Q2NKJ3 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTC1Q2NKJ3 AL513523.2-202ENST00000427283 2040 ntBASIC17.14■□□□□ 0.34
CTC1Q2NKJ3 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CTC1Q2NKJ3 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
CTC1Q2NKJ3 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CTC1Q2NKJ3 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTC1Q2NKJ3 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CTC1Q2NKJ3 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CTC1Q2NKJ3 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
CTC1Q2NKJ3 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.14■□□□□ 0.33
CTC1Q2NKJ3 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTC1Q2NKJ3 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CTC1Q2NKJ3 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CTC1Q2NKJ3 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTC1Q2NKJ3 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CTC1Q2NKJ3 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.14■□□□□ 0.33
CTC1Q2NKJ3 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTC1Q2NKJ3 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTC1Q2NKJ3 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC17.14■□□□□ 0.33
CTC1Q2NKJ3 AC004945.1-201ENST00000416738 983 ntBASIC17.14■□□□□ 0.33
CTC1Q2NKJ3 BCYRN1-201ENST00000418539 200 ntBASIC17.14■□□□□ 0.33
CTC1Q2NKJ3 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.14■□□□□ 0.33
CTC1Q2NKJ3 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTC1Q2NKJ3 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
CTC1Q2NKJ3 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.14■□□□□ 0.33
CTC1Q2NKJ3 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTC1Q2NKJ3 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC17.14■□□□□ 0.33
CTC1Q2NKJ3 AC068587.10-201ENST00000641210 219 ntBASIC17.14■□□□□ 0.33
CTC1Q2NKJ3 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.14■□□□□ 0.33
CTC1Q2NKJ3 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CTC1Q2NKJ3 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTC1Q2NKJ3 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTC1Q2NKJ3 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
CTC1Q2NKJ3 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CTC1Q2NKJ3 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms