Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC27Q2M243 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC27Q2M243 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC27Q2M243 AL607033.1-201ENST00000623900 1599 ntBASIC20.82■□□□□ 0.92
CCDC27Q2M243 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC27Q2M243 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC27Q2M243 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC27Q2M243 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC20.82■□□□□ 0.92
CCDC27Q2M243 AC241585.1-201ENST00000433527 519 ntBASIC20.82■□□□□ 0.92
CCDC27Q2M243 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC20.82■□□□□ 0.92
CCDC27Q2M243 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC27Q2M243 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC20.82■□□□□ 0.92
CCDC27Q2M243 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC20.82■□□□□ 0.92
CCDC27Q2M243 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC27Q2M243 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CCDC27Q2M243 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CCDC27Q2M243 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC27Q2M243 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC27Q2M243 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC20.82■□□□□ 0.92
CCDC27Q2M243 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC20.82■□□□□ 0.92
CCDC27Q2M243 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC27Q2M243 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC27Q2M243 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC20.82■□□□□ 0.92
CCDC27Q2M243 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC27Q2M243 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC20.82■□□□□ 0.92
CCDC27Q2M243 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC27Q2M243 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC27Q2M243 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC27Q2M243 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC27Q2M243 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC27Q2M243 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC27Q2M243 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC27Q2M243 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC27Q2M243 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC20.81■□□□□ 0.92
CCDC27Q2M243 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC27Q2M243 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
CCDC27Q2M243 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC27Q2M243 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC27Q2M243 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC27Q2M243 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC27Q2M243 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC27Q2M243 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC27Q2M243 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CCDC27Q2M243 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC20.81■□□□□ 0.92
CCDC27Q2M243 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC20.81■□□□□ 0.92
CCDC27Q2M243 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC27Q2M243 AC004890.2-204ENST00000481968 304 ntBASIC20.81■□□□□ 0.92
CCDC27Q2M243 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC20.81■□□□□ 0.92
CCDC27Q2M243 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC27Q2M243 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC27Q2M243 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC27Q2M243 AC005498.2-205ENST00000593218 784 ntBASIC20.81■□□□□ 0.92
CCDC27Q2M243 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC20.81■□□□□ 0.92
CCDC27Q2M243 AC106028.4-201ENST00000614509 607 ntBASIC20.81■□□□□ 0.92
CCDC27Q2M243 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC27Q2M243 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC27Q2M243 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC20.81■□□□□ 0.92
CCDC27Q2M243 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC27Q2M243 GRN-214ENST00000589265 1632 ntTSL 5 BASIC20.81■□□□□ 0.92
CCDC27Q2M243 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC27Q2M243 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC27Q2M243 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CCDC27Q2M243 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC27Q2M243 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC27Q2M243 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC27Q2M243 DKFZP434H168-201ENST00000567381 1905 ntBASIC20.8■□□□□ 0.92
CCDC27Q2M243 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC27Q2M243 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC27Q2M243 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC27Q2M243 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC27Q2M243 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
CCDC27Q2M243 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
CCDC27Q2M243 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC27Q2M243 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC27Q2M243 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC27Q2M243 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC20.8■□□□□ 0.92
CCDC27Q2M243 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC27Q2M243 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC20.8■□□□□ 0.92
CCDC27Q2M243 RN7SL618P-201ENST00000477850 296 ntBASIC20.8■□□□□ 0.92
CCDC27Q2M243 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC20.8■□□□□ 0.92
CCDC27Q2M243 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC20.8■□□□□ 0.92
CCDC27Q2M243 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC20.8■□□□□ 0.92
CCDC27Q2M243 TKT-202ENST00000423516 2075 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC27Q2M243 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
CCDC27Q2M243 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
CCDC27Q2M243 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC20.8■□□□□ 0.92
CCDC27Q2M243 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
CCDC27Q2M243 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC27Q2M243 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC27Q2M243 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC27Q2M243 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC27Q2M243 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC27Q2M243 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
CCDC27Q2M243 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC27Q2M243 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC27Q2M243 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC27Q2M243 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC27Q2M243 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC27Q2M243 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC27Q2M243 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms