Protein–RNA interactions for Protein: Q13698

CACNA1S, Voltage-dependent L-type calcium channel subunit alpha-1S, humanhuman

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1SQ13698 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC19.42■□□□□ 0.7
CACNA1SQ13698 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CACNA1SQ13698 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CACNA1SQ13698 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
CACNA1SQ13698 SLC25A24P2-201ENST00000415059 510 ntBASIC19.42■□□□□ 0.7
CACNA1SQ13698 ZBTB45P2-201ENST00000452245 1531 ntBASIC19.42■□□□□ 0.7
CACNA1SQ13698 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
CACNA1SQ13698 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
CACNA1SQ13698 SDHD-202ENST00000525291 790 ntTSL 3 BASIC19.42■□□□□ 0.7
CACNA1SQ13698 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CACNA1SQ13698 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CACNA1SQ13698 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CACNA1SQ13698 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC19.42■□□□□ 0.7
CACNA1SQ13698 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CACNA1SQ13698 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CACNA1SQ13698 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC19.42■□□□□ 0.7
CACNA1SQ13698 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC19.42■□□□□ 0.7
CACNA1SQ13698 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA1SQ13698 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA1SQ13698 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA1SQ13698 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA1SQ13698 C2orf27AP3-201ENST00000434123 579 ntBASIC19.41■□□□□ 0.7
CACNA1SQ13698 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC19.41■□□□□ 0.7
CACNA1SQ13698 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC19.41■□□□□ 0.7
CACNA1SQ13698 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA1SQ13698 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC19.41■□□□□ 0.7
CACNA1SQ13698 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC19.41■□□□□ 0.7
CACNA1SQ13698 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC19.41■□□□□ 0.7
CACNA1SQ13698 AL354718.3-201ENST00000616414 581 ntBASIC19.41■□□□□ 0.7
CACNA1SQ13698 CR382287.1-201ENST00000623954 586 ntBASIC19.41■□□□□ 0.7
CACNA1SQ13698 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC19.41■□□□□ 0.7
CACNA1SQ13698 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC19.41■□□□□ 0.7
CACNA1SQ13698 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA1SQ13698 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC19.41■□□□□ 0.7
CACNA1SQ13698 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CACNA1SQ13698 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC19.41■□□□□ 0.7
CACNA1SQ13698 AGER-206ENST00000375070 1463 ntTSL 5 BASIC19.41■□□□□ 0.7
CACNA1SQ13698 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA1SQ13698 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC19.41■□□□□ 0.7
CACNA1SQ13698 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.41■□□□□ 0.7
CACNA1SQ13698 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA1SQ13698 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC19.41■□□□□ 0.7
CACNA1SQ13698 NKILA-202ENST00000614771 2598 ntBASIC19.41■□□□□ 0.7
CACNA1SQ13698 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA1SQ13698 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA1SQ13698 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA1SQ13698 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA1SQ13698 EIF4HP1-201ENST00000453115 687 ntBASIC19.41■□□□□ 0.7
CACNA1SQ13698 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC19.41■□□□□ 0.7
CACNA1SQ13698 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC19.41■□□□□ 0.7
CACNA1SQ13698 AC015910.1-201ENST00000579400 975 ntBASIC19.41■□□□□ 0.7
CACNA1SQ13698 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC19.41■□□□□ 0.7
CACNA1SQ13698 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA1SQ13698 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CACNA1SQ13698 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CACNA1SQ13698 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC19.4■□□□□ 0.7
CACNA1SQ13698 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CACNA1SQ13698 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CACNA1SQ13698 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CACNA1SQ13698 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CACNA1SQ13698 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CACNA1SQ13698 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CACNA1SQ13698 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC19.4■□□□□ 0.7
CACNA1SQ13698 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CACNA1SQ13698 AL133267.1-201ENST00000398220 340 ntBASIC19.4■□□□□ 0.7
CACNA1SQ13698 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC19.4■□□□□ 0.7
CACNA1SQ13698 OARD1-212ENST00000482515 832 ntTSL 2 BASIC19.4■□□□□ 0.7
CACNA1SQ13698 SCARNA20.5-201ENST00000516991 142 ntBASIC19.4■□□□□ 0.7
CACNA1SQ13698 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CACNA1SQ13698 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC19.4■□□□□ 0.7
CACNA1SQ13698 AL607033.1-201ENST00000623900 1599 ntBASIC19.4■□□□□ 0.7
CACNA1SQ13698 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.4■□□□□ 0.7
CACNA1SQ13698 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CACNA1SQ13698 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CACNA1SQ13698 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CACNA1SQ13698 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CACNA1SQ13698 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CACNA1SQ13698 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CACNA1SQ13698 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CACNA1SQ13698 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CACNA1SQ13698 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CACNA1SQ13698 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CACNA1SQ13698 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC19.39■□□□□ 0.7
CACNA1SQ13698 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC19.39■□□□□ 0.7
CACNA1SQ13698 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC19.39■□□□□ 0.7
CACNA1SQ13698 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC19.39■□□□□ 0.7
CACNA1SQ13698 MIR4741-201ENST00000579822 90 ntBASIC19.39■□□□□ 0.7
CACNA1SQ13698 AC093813.1-201ENST00000605066 256 ntBASIC19.39■□□□□ 0.7
CACNA1SQ13698 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC19.39■□□□□ 0.7
CACNA1SQ13698 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC19.39■□□□□ 0.69
CACNA1SQ13698 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CACNA1SQ13698 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC19.39■□□□□ 0.69
CACNA1SQ13698 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CACNA1SQ13698 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CACNA1SQ13698 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CACNA1SQ13698 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CACNA1SQ13698 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CACNA1SQ13698 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC19.39■□□□□ 0.69
CACNA1SQ13698 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC19.39■□□□□ 0.69
CACNA1SQ13698 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms