Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H1AQ02539 BANP-203ENST00000393207 2438 ntTSL 2 BASIC12.41□□□□□ -0.42
HIST1H1AQ02539 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H1AQ02539 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H1AQ02539 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H1AQ02539 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H1AQ02539 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
HIST1H1AQ02539 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
HIST1H1AQ02539 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H1AQ02539 AC012569.1-201ENST00000591191 1524 ntBASIC12.41□□□□□ -0.42
HIST1H1AQ02539 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC12.41□□□□□ -0.42
HIST1H1AQ02539 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H1AQ02539 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H1AQ02539 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H1AQ02539 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H1AQ02539 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC12.41□□□□□ -0.42
HIST1H1AQ02539 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
HIST1H1AQ02539 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC12.41□□□□□ -0.42
HIST1H1AQ02539 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H1AQ02539 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H1AQ02539 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC12.41□□□□□ -0.42
HIST1H1AQ02539 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC12.4□□□□□ -0.42
HIST1H1AQ02539 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H1AQ02539 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H1AQ02539 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H1AQ02539 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC12.4□□□□□ -0.42
HIST1H1AQ02539 SLC9A3P2-201ENST00000447821 2021 ntBASIC12.4□□□□□ -0.42
HIST1H1AQ02539 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H1AQ02539 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H1AQ02539 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC12.4□□□□□ -0.42
HIST1H1AQ02539 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC12.4□□□□□ -0.42
HIST1H1AQ02539 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
HIST1H1AQ02539 LINC01144-201ENST00000626198 1710 ntBASIC12.4□□□□□ -0.42
HIST1H1AQ02539 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H1AQ02539 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC12.4□□□□□ -0.42
HIST1H1AQ02539 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
HIST1H1AQ02539 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H1AQ02539 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H1AQ02539 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H1AQ02539 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC12.4□□□□□ -0.42
HIST1H1AQ02539 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC12.4□□□□□ -0.42
HIST1H1AQ02539 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H1AQ02539 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H1AQ02539 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H1AQ02539 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H1AQ02539 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H1AQ02539 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H1AQ02539 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC12.4□□□□□ -0.42
HIST1H1AQ02539 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC12.4□□□□□ -0.42
HIST1H1AQ02539 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
HIST1H1AQ02539 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC12.4□□□□□ -0.42
HIST1H1AQ02539 SLC4A1APP2-201ENST00000424054 1259 ntBASIC12.4□□□□□ -0.42
HIST1H1AQ02539 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC12.4□□□□□ -0.42
HIST1H1AQ02539 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
HIST1H1AQ02539 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC12.4□□□□□ -0.42
HIST1H1AQ02539 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC12.4□□□□□ -0.42
HIST1H1AQ02539 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC12.4□□□□□ -0.42
HIST1H1AQ02539 RIN3-211ENST00000557762 517 ntTSL 3 BASIC12.4□□□□□ -0.42
HIST1H1AQ02539 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC12.4□□□□□ -0.42
HIST1H1AQ02539 RPS15-207ENST00000591032 550 ntTSL 3 BASIC12.4□□□□□ -0.42
HIST1H1AQ02539 RPS15-212ENST00000593052 629 ntTSL 2 BASIC12.4□□□□□ -0.42
HIST1H1AQ02539 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC12.4□□□□□ -0.42
HIST1H1AQ02539 IRF5-214ENST00000613821 595 ntTSL 5 BASIC12.4□□□□□ -0.42
HIST1H1AQ02539 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H1AQ02539 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H1AQ02539 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H1AQ02539 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC12.4□□□□□ -0.42
HIST1H1AQ02539 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H1AQ02539 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H1AQ02539 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
HIST1H1AQ02539 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
HIST1H1AQ02539 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H1AQ02539 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H1AQ02539 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H1AQ02539 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H1AQ02539 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H1AQ02539 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H1AQ02539 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC12.4□□□□□ -0.42
HIST1H1AQ02539 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H1AQ02539 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.43
HIST1H1AQ02539 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
HIST1H1AQ02539 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC12.4□□□□□ -0.43
HIST1H1AQ02539 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC12.4□□□□□ -0.43
HIST1H1AQ02539 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
HIST1H1AQ02539 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC12.39□□□□□ -0.43
HIST1H1AQ02539 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC12.39□□□□□ -0.43
HIST1H1AQ02539 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC12.39□□□□□ -0.43
HIST1H1AQ02539 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H1AQ02539 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H1AQ02539 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
HIST1H1AQ02539 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC12.39□□□□□ -0.43
HIST1H1AQ02539 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H1AQ02539 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC12.39□□□□□ -0.43
HIST1H1AQ02539 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC12.39□□□□□ -0.43
HIST1H1AQ02539 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC12.39□□□□□ -0.43
HIST1H1AQ02539 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H1AQ02539 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H1AQ02539 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H1AQ02539 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H1AQ02539 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms