Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AL671883.3-201ENST00000603274 991 ntBASIC15.54■□□□□ 0.08
HMGCS1Q01581 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGCS1Q01581 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.54■□□□□ 0.08
HMGCS1Q01581 NORAD-201ENST00000565493 5339 ntBASIC15.54■□□□□ 0.08
HMGCS1Q01581 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.54■□□□□ 0.08
HMGCS1Q01581 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.54■□□□□ 0.08
HMGCS1Q01581 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.54■□□□□ 0.08
HMGCS1Q01581 AC011270.2-201ENST00000624293 2550 ntBASIC15.54■□□□□ 0.08
HMGCS1Q01581 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.54■□□□□ 0.08
HMGCS1Q01581 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
HMGCS1Q01581 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.54■□□□□ 0.08
HMGCS1Q01581 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HMGCS1Q01581 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
HMGCS1Q01581 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGCS1Q01581 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGCS1Q01581 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.53■□□□□ 0.08
HMGCS1Q01581 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HMGCS1Q01581 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.53■□□□□ 0.08
HMGCS1Q01581 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.53■□□□□ 0.08
HMGCS1Q01581 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HMGCS1Q01581 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGCS1Q01581 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.53■□□□□ 0.08
HMGCS1Q01581 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.53■□□□□ 0.08
HMGCS1Q01581 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGCS1Q01581 PPT1-215ENST00000641471 2368 ntBASIC15.53■□□□□ 0.08
HMGCS1Q01581 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGCS1Q01581 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGCS1Q01581 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HMGCS1Q01581 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGCS1Q01581 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
HMGCS1Q01581 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.53■□□□□ 0.08
HMGCS1Q01581 GPX1P2-201ENST00000429271 606 ntBASIC15.53■□□□□ 0.08
HMGCS1Q01581 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.53■□□□□ 0.08
HMGCS1Q01581 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
HMGCS1Q01581 RARRES2P8-201ENST00000566335 367 ntBASIC15.53■□□□□ 0.08
HMGCS1Q01581 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGCS1Q01581 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.53■□□□□ 0.08
HMGCS1Q01581 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.53■□□□□ 0.08
HMGCS1Q01581 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
HMGCS1Q01581 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HMGCS1Q01581 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.53■□□□□ 0.08
HMGCS1Q01581 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
HMGCS1Q01581 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGCS1Q01581 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HMGCS1Q01581 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGCS1Q01581 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGCS1Q01581 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HMGCS1Q01581 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGCS1Q01581 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGCS1Q01581 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
HMGCS1Q01581 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGCS1Q01581 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
HMGCS1Q01581 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.52■□□□□ 0.08
HMGCS1Q01581 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
HMGCS1Q01581 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
HMGCS1Q01581 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HMGCS1Q01581 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HMGCS1Q01581 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.52■□□□□ 0.08
HMGCS1Q01581 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
HMGCS1Q01581 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
HMGCS1Q01581 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
HMGCS1Q01581 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
HMGCS1Q01581 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.52■□□□□ 0.08
HMGCS1Q01581 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HMGCS1Q01581 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HMGCS1Q01581 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
HMGCS1Q01581 MIR940-201ENST00000401276 94 ntBASIC15.52■□□□□ 0.08
HMGCS1Q01581 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
HMGCS1Q01581 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.52■□□□□ 0.08
HMGCS1Q01581 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HMGCS1Q01581 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.52■□□□□ 0.08
HMGCS1Q01581 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.52■□□□□ 0.08
HMGCS1Q01581 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
HMGCS1Q01581 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HMGCS1Q01581 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.52■□□□□ 0.08
HMGCS1Q01581 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.52■□□□□ 0.08
HMGCS1Q01581 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.52■□□□□ 0.08
HMGCS1Q01581 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HMGCS1Q01581 AC136621.1-201ENST00000624017 2304 ntBASIC15.52■□□□□ 0.07
HMGCS1Q01581 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
HMGCS1Q01581 AC011477.6-201ENST00000604980 1927 ntBASIC15.52■□□□□ 0.07
HMGCS1Q01581 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
HMGCS1Q01581 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.52■□□□□ 0.07
HMGCS1Q01581 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.07
HMGCS1Q01581 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
HMGCS1Q01581 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.52■□□□□ 0.07
HMGCS1Q01581 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HMGCS1Q01581 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
HMGCS1Q01581 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
HMGCS1Q01581 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.51■□□□□ 0.07
HMGCS1Q01581 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.51■□□□□ 0.07
HMGCS1Q01581 AC103702.1-201ENST00000548801 2630 ntBASIC15.51■□□□□ 0.07
HMGCS1Q01581 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.51■□□□□ 0.07
HMGCS1Q01581 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.51■□□□□ 0.07
HMGCS1Q01581 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMGCS1Q01581 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
HMGCS1Q01581 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMGCS1Q01581 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMGCS1Q01581 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.51■□□□□ 0.07
HMGCS1Q01581 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms