Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.07□□□□□ -0.16
HIST1H3AP68431 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.07□□□□□ -0.16
HIST1H3AP68431 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.07□□□□□ -0.16
HIST1H3AP68431 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HIST1H3AP68431 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HIST1H3AP68431 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HIST1H3AP68431 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HIST1H3AP68431 BNIP3P1-202ENST00000550043 1585 ntBASIC14.07□□□□□ -0.16
HIST1H3AP68431 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HIST1H3AP68431 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HIST1H3AP68431 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HIST1H3AP68431 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HIST1H3AP68431 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HIST1H3AP68431 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HIST1H3AP68431 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HIST1H3AP68431 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.07□□□□□ -0.16
HIST1H3AP68431 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.07□□□□□ -0.16
HIST1H3AP68431 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
HIST1H3AP68431 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
HIST1H3AP68431 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HIST1H3AP68431 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
HIST1H3AP68431 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
HIST1H3AP68431 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HIST1H3AP68431 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HIST1H3AP68431 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.06□□□□□ -0.16
HIST1H3AP68431 UXT-AS1-201ENST00000590504 1525 ntBASIC14.06□□□□□ -0.16
HIST1H3AP68431 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HIST1H3AP68431 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
HIST1H3AP68431 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HIST1H3AP68431 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.06□□□□□ -0.16
HIST1H3AP68431 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HIST1H3AP68431 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HIST1H3AP68431 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.06□□□□□ -0.16
HIST1H3AP68431 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HIST1H3AP68431 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HIST1H3AP68431 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
HIST1H3AP68431 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HIST1H3AP68431 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HIST1H3AP68431 RPSAP43-201ENST00000402237 625 ntBASIC14.06□□□□□ -0.16
HIST1H3AP68431 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HIST1H3AP68431 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.06□□□□□ -0.16
HIST1H3AP68431 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HIST1H3AP68431 AC112482.1-201ENST00000492080 688 ntBASIC14.06□□□□□ -0.16
HIST1H3AP68431 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.06□□□□□ -0.16
HIST1H3AP68431 RARRES2P9-201ENST00000565168 469 ntBASIC14.06□□□□□ -0.16
HIST1H3AP68431 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.06□□□□□ -0.16
HIST1H3AP68431 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
HIST1H3AP68431 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
HIST1H3AP68431 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HIST1H3AP68431 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.06□□□□□ -0.16
HIST1H3AP68431 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HIST1H3AP68431 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HIST1H3AP68431 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HIST1H3AP68431 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.06□□□□□ -0.16
HIST1H3AP68431 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
HIST1H3AP68431 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HIST1H3AP68431 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.06□□□□□ -0.16
HIST1H3AP68431 FLJ16779-201ENST00000612722 7638 ntBASIC14.06□□□□□ -0.16
HIST1H3AP68431 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.06□□□□□ -0.16
HIST1H3AP68431 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
HIST1H3AP68431 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HIST1H3AP68431 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
HIST1H3AP68431 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.06□□□□□ -0.16
HIST1H3AP68431 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.06□□□□□ -0.16
HIST1H3AP68431 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.05□□□□□ -0.16
HIST1H3AP68431 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.05□□□□□ -0.16
HIST1H3AP68431 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.05□□□□□ -0.16
HIST1H3AP68431 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.05□□□□□ -0.16
HIST1H3AP68431 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.05□□□□□ -0.16
HIST1H3AP68431 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
HIST1H3AP68431 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HIST1H3AP68431 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
HIST1H3AP68431 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.05□□□□□ -0.16
HIST1H3AP68431 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HIST1H3AP68431 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HIST1H3AP68431 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HIST1H3AP68431 AC004461.1-201ENST00000412461 403 ntBASIC14.05□□□□□ -0.16
HIST1H3AP68431 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.05□□□□□ -0.16
HIST1H3AP68431 EEF1DP4-201ENST00000446006 880 ntBASIC14.05□□□□□ -0.16
HIST1H3AP68431 AL139010.1-201ENST00000454878 894 ntBASIC14.05□□□□□ -0.16
HIST1H3AP68431 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.05□□□□□ -0.16
HIST1H3AP68431 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.05□□□□□ -0.16
HIST1H3AP68431 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.05□□□□□ -0.16
HIST1H3AP68431 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.05□□□□□ -0.16
HIST1H3AP68431 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.05□□□□□ -0.16
HIST1H3AP68431 AC093520.2-201ENST00000561830 333 ntBASIC14.05□□□□□ -0.16
HIST1H3AP68431 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.05□□□□□ -0.16
HIST1H3AP68431 MIR4469-201ENST00000583919 79 ntBASIC14.05□□□□□ -0.16
HIST1H3AP68431 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
HIST1H3AP68431 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
HIST1H3AP68431 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
HIST1H3AP68431 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.05□□□□□ -0.16
HIST1H3AP68431 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HIST1H3AP68431 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.05□□□□□ -0.16
HIST1H3AP68431 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HIST1H3AP68431 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.05□□□□□ -0.16
HIST1H3AP68431 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.05□□□□□ -0.16
HIST1H3AP68431 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.05□□□□□ -0.16
HIST1H3AP68431 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HIST1H3AP68431 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms