Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.68■□□□□ 0.1
YBX1P67809 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
YBX1P67809 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
YBX1P67809 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
YBX1P67809 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.68■□□□□ 0.1
YBX1P67809 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
YBX1P67809 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.68■□□□□ 0.1
YBX1P67809 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
YBX1P67809 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
YBX1P67809 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
YBX1P67809 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
YBX1P67809 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
YBX1P67809 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
YBX1P67809 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
YBX1P67809 AC008677.1-201ENST00000519230 1561 ntBASIC15.68■□□□□ 0.1
YBX1P67809 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
YBX1P67809 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
YBX1P67809 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
YBX1P67809 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
YBX1P67809 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
YBX1P67809 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
YBX1P67809 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.68■□□□□ 0.1
YBX1P67809 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.68■□□□□ 0.1
YBX1P67809 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.68■□□□□ 0.1
YBX1P67809 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
YBX1P67809 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
YBX1P67809 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
YBX1P67809 RNA5SP410-201ENST00000516285 106 ntBASIC15.68■□□□□ 0.1
YBX1P67809 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
YBX1P67809 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.68■□□□□ 0.1
YBX1P67809 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.68■□□□□ 0.1
YBX1P67809 AC061975.2-201ENST00000581722 295 ntBASIC15.68■□□□□ 0.1
YBX1P67809 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.68■□□□□ 0.1
YBX1P67809 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
YBX1P67809 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
YBX1P67809 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
YBX1P67809 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
YBX1P67809 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.68■□□□□ 0.1
YBX1P67809 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
YBX1P67809 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.68■□□□□ 0.1
YBX1P67809 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
YBX1P67809 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
YBX1P67809 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
YBX1P67809 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.67■□□□□ 0.1
YBX1P67809 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
YBX1P67809 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.67■□□□□ 0.1
YBX1P67809 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
YBX1P67809 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
YBX1P67809 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.67■□□□□ 0.1
YBX1P67809 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
YBX1P67809 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
YBX1P67809 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.67■□□□□ 0.1
YBX1P67809 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
YBX1P67809 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
YBX1P67809 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
YBX1P67809 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
YBX1P67809 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
YBX1P67809 FAM220BP-201ENST00000377689 816 ntBASIC15.67■□□□□ 0.1
YBX1P67809 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.67■□□□□ 0.1
YBX1P67809 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
YBX1P67809 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.67■□□□□ 0.1
YBX1P67809 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.67■□□□□ 0.1
YBX1P67809 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
YBX1P67809 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.67■□□□□ 0.1
YBX1P67809 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.67■□□□□ 0.1
YBX1P67809 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.67■□□□□ 0.1
YBX1P67809 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.67■□□□□ 0.1
YBX1P67809 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.67■□□□□ 0.1
YBX1P67809 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.67■□□□□ 0.1
YBX1P67809 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.67■□□□□ 0.1
YBX1P67809 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.67■□□□□ 0.1
YBX1P67809 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
YBX1P67809 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
YBX1P67809 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.67■□□□□ 0.1
YBX1P67809 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
YBX1P67809 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
YBX1P67809 MST1L-201ENST00000442552 2185 ntBASIC15.67■□□□□ 0.1
YBX1P67809 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
YBX1P67809 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.67■□□□□ 0.1
YBX1P67809 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
YBX1P67809 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
YBX1P67809 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
YBX1P67809 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.67■□□□□ 0.1
YBX1P67809 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
YBX1P67809 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
YBX1P67809 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
YBX1P67809 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
YBX1P67809 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
YBX1P67809 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.67■□□□□ 0.1
YBX1P67809 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
YBX1P67809 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC15.67■□□□□ 0.1
YBX1P67809 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
YBX1P67809 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
YBX1P67809 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
YBX1P67809 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
YBX1P67809 OR6D1P-203ENST00000641209 4860 ntBASIC15.66■□□□□ 0.1
YBX1P67809 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.66■□□□□ 0.1
YBX1P67809 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
YBX1P67809 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.66■□□□□ 0.1
YBX1P67809 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms