Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RPS4XP62701 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RPS4XP62701 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RPS4XP62701 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
RPS4XP62701 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.53□□□□□ -0.08
RPS4XP62701 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.53□□□□□ -0.08
RPS4XP62701 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
RPS4XP62701 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RPS4XP62701 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RPS4XP62701 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.08
RPS4XP62701 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
RPS4XP62701 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.52□□□□□ -0.08
RPS4XP62701 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
RPS4XP62701 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.52□□□□□ -0.08
RPS4XP62701 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.52□□□□□ -0.08
RPS4XP62701 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
RPS4XP62701 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RPS4XP62701 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
RPS4XP62701 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RPS4XP62701 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RPS4XP62701 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RPS4XP62701 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RPS4XP62701 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RPS4XP62701 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
RPS4XP62701 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.52□□□□□ -0.09
RPS4XP62701 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RPS4XP62701 FAM86GP-201ENST00000448322 971 ntBASIC14.52□□□□□ -0.09
RPS4XP62701 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.52□□□□□ -0.09
RPS4XP62701 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.52□□□□□ -0.09
RPS4XP62701 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
RPS4XP62701 HLA-J-203ENST00000494367 1087 ntBASIC14.52□□□□□ -0.09
RPS4XP62701 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.09
RPS4XP62701 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.52□□□□□ -0.09
RPS4XP62701 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RPS4XP62701 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
RPS4XP62701 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.52□□□□□ -0.09
RPS4XP62701 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
RPS4XP62701 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.52□□□□□ -0.09
RPS4XP62701 LINC00628-201ENST00000628516 1289 ntBASIC14.52□□□□□ -0.09
RPS4XP62701 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
RPS4XP62701 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RPS4XP62701 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RPS4XP62701 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RPS4XP62701 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RPS4XP62701 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RPS4XP62701 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RPS4XP62701 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
RPS4XP62701 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.52□□□□□ -0.09
RPS4XP62701 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RPS4XP62701 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RPS4XP62701 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RPS4XP62701 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RPS4XP62701 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RPS4XP62701 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RPS4XP62701 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.51□□□□□ -0.09
RPS4XP62701 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
RPS4XP62701 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.51□□□□□ -0.09
RPS4XP62701 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.51□□□□□ -0.09
RPS4XP62701 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.51□□□□□ -0.09
RPS4XP62701 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RPS4XP62701 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
RPS4XP62701 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.51□□□□□ -0.09
RPS4XP62701 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RPS4XP62701 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.51□□□□□ -0.09
RPS4XP62701 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RPS4XP62701 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.51□□□□□ -0.09
RPS4XP62701 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
RPS4XP62701 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RPS4XP62701 AC020658.6-201ENST00000623564 1870 ntBASIC14.51□□□□□ -0.09
RPS4XP62701 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RPS4XP62701 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.51□□□□□ -0.09
RPS4XP62701 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RPS4XP62701 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.51□□□□□ -0.09
RPS4XP62701 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RPS4XP62701 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RPS4XP62701 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.51□□□□□ -0.09
RPS4XP62701 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.51□□□□□ -0.09
RPS4XP62701 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.51□□□□□ -0.09
RPS4XP62701 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
RPS4XP62701 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RPS4XP62701 AC142381.1-201ENST00000426099 345 ntBASIC14.51□□□□□ -0.09
RPS4XP62701 AL671277.1-201ENST00000429656 993 ntBASIC14.51□□□□□ -0.09
RPS4XP62701 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.51□□□□□ -0.09
RPS4XP62701 SPDYE11-202ENST00000450699 704 ntBASIC14.51□□□□□ -0.09
RPS4XP62701 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RPS4XP62701 RN7SL589P-201ENST00000481268 310 ntBASIC14.51□□□□□ -0.09
RPS4XP62701 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.51□□□□□ -0.09
RPS4XP62701 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.51□□□□□ -0.09
RPS4XP62701 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.51□□□□□ -0.09
RPS4XP62701 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.51□□□□□ -0.09
RPS4XP62701 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.51□□□□□ -0.09
RPS4XP62701 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.51□□□□□ -0.09
RPS4XP62701 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
RPS4XP62701 AL135744.1-201ENST00000565098 629 ntBASIC14.51□□□□□ -0.09
RPS4XP62701 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.51□□□□□ -0.09
RPS4XP62701 SPDYE9P-201ENST00000570642 692 ntBASIC14.51□□□□□ -0.09
RPS4XP62701 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.51□□□□□ -0.09
RPS4XP62701 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.51□□□□□ -0.09
RPS4XP62701 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RPS4XP62701 SPDYE10P-202ENST00000612005 668 ntBASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms