Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
COL15A1P39059 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL15A1P39059 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
COL15A1P39059 GZMB-202ENST00000382540 816 ntTSL 5 BASIC20.15■□□□□ 0.82
COL15A1P39059 AC092933.1-201ENST00000393644 945 ntBASIC20.15■□□□□ 0.82
COL15A1P39059 BRWD1P1-201ENST00000401091 371 ntBASIC20.15■□□□□ 0.82
COL15A1P39059 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL15A1P39059 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC20.15■□□□□ 0.82
COL15A1P39059 AC099548.2-209ENST00000480264 625 ntBASIC20.15■□□□□ 0.82
COL15A1P39059 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC20.15■□□□□ 0.82
COL15A1P39059 AC106760.1-201ENST00000508690 800 ntBASIC20.15■□□□□ 0.82
COL15A1P39059 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC20.15■□□□□ 0.82
COL15A1P39059 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC20.15■□□□□ 0.82
COL15A1P39059 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
COL15A1P39059 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL15A1P39059 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL15A1P39059 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL15A1P39059 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL15A1P39059 AC020907.1-201ENST00000616460 1350 ntBASIC20.15■□□□□ 0.82
COL15A1P39059 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC20.14■□□□□ 0.82
COL15A1P39059 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC20.14■□□□□ 0.82
COL15A1P39059 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
COL15A1P39059 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
COL15A1P39059 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
COL15A1P39059 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC20.14■□□□□ 0.82
COL15A1P39059 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC20.14■□□□□ 0.82
COL15A1P39059 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC20.14■□□□□ 0.81
COL15A1P39059 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
COL15A1P39059 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
COL15A1P39059 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
COL15A1P39059 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC20.14■□□□□ 0.81
COL15A1P39059 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
COL15A1P39059 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL15A1P39059 AC108725.1-201ENST00000495472 409 ntBASIC20.14■□□□□ 0.81
COL15A1P39059 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC20.14■□□□□ 0.81
COL15A1P39059 HNRNPUP1-201ENST00000554987 333 ntBASIC20.14■□□□□ 0.81
COL15A1P39059 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC20.14■□□□□ 0.81
COL15A1P39059 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC20.14■□□□□ 0.81
COL15A1P39059 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC20.14■□□□□ 0.81
COL15A1P39059 AC005252.2-201ENST00000624630 1141 ntBASIC20.14■□□□□ 0.81
COL15A1P39059 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC20.14■□□□□ 0.81
COL15A1P39059 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC20.14■□□□□ 0.81
COL15A1P39059 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
COL15A1P39059 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
COL15A1P39059 BCL2-203ENST00000589955 5011 ntBASIC20.14■□□□□ 0.81
COL15A1P39059 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC20.14■□□□□ 0.81
COL15A1P39059 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
COL15A1P39059 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC20.14■□□□□ 0.81
COL15A1P39059 AC006449.6-201ENST00000612330 2296 ntBASIC20.14■□□□□ 0.81
COL15A1P39059 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
COL15A1P39059 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
COL15A1P39059 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL15A1P39059 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL15A1P39059 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
COL15A1P39059 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL15A1P39059 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL15A1P39059 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC20.14■□□□□ 0.81
COL15A1P39059 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC20.13■□□□□ 0.81
COL15A1P39059 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL15A1P39059 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL15A1P39059 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
COL15A1P39059 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC20.13■□□□□ 0.81
COL15A1P39059 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC20.13■□□□□ 0.81
COL15A1P39059 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL15A1P39059 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC20.13■□□□□ 0.81
COL15A1P39059 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL15A1P39059 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL15A1P39059 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC20.13■□□□□ 0.81
COL15A1P39059 AC012441.1-201ENST00000446669 685 ntBASIC20.13■□□□□ 0.81
COL15A1P39059 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC20.13■□□□□ 0.81
COL15A1P39059 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
COL15A1P39059 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC20.13■□□□□ 0.81
COL15A1P39059 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL15A1P39059 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC20.13■□□□□ 0.81
COL15A1P39059 CD74-212ENST00000524315 584 ntTSL 5 BASIC20.13■□□□□ 0.81
COL15A1P39059 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
COL15A1P39059 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
COL15A1P39059 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL15A1P39059 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
COL15A1P39059 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC20.13■□□□□ 0.81
COL15A1P39059 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
COL15A1P39059 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL15A1P39059 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC20.13■□□□□ 0.81
COL15A1P39059 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL15A1P39059 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL15A1P39059 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
COL15A1P39059 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC20.13■□□□□ 0.81
COL15A1P39059 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
COL15A1P39059 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL15A1P39059 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
COL15A1P39059 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC20.13■□□□□ 0.81
COL15A1P39059 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL15A1P39059 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
COL15A1P39059 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL15A1P39059 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL15A1P39059 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL15A1P39059 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
COL15A1P39059 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL15A1P39059 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
COL15A1P39059 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms