Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17■□□□□ 0.31
CHRNA3P32297 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CHRNA3P32297 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHRNA3P32297 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17■□□□□ 0.31
CHRNA3P32297 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
CHRNA3P32297 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHRNA3P32297 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
CHRNA3P32297 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17■□□□□ 0.31
CHRNA3P32297 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17■□□□□ 0.31
CHRNA3P32297 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17■□□□□ 0.31
CHRNA3P32297 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17■□□□□ 0.31
CHRNA3P32297 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CHRNA3P32297 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHRNA3P32297 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
CHRNA3P32297 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHRNA3P32297 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17■□□□□ 0.31
CHRNA3P32297 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHRNA3P32297 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHRNA3P32297 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CHRNA3P32297 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC17■□□□□ 0.31
CHRNA3P32297 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHRNA3P32297 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17■□□□□ 0.31
CHRNA3P32297 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC17■□□□□ 0.31
CHRNA3P32297 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17■□□□□ 0.31
CHRNA3P32297 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CHRNA3P32297 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
CHRNA3P32297 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CHRNA3P32297 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
CHRNA3P32297 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.99■□□□□ 0.31
CHRNA3P32297 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHRNA3P32297 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.99■□□□□ 0.31
CHRNA3P32297 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHRNA3P32297 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
CHRNA3P32297 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.99■□□□□ 0.31
CHRNA3P32297 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.99■□□□□ 0.31
CHRNA3P32297 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CHRNA3P32297 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.99■□□□□ 0.31
CHRNA3P32297 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CHRNA3P32297 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.99■□□□□ 0.31
CHRNA3P32297 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.99■□□□□ 0.31
CHRNA3P32297 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.99■□□□□ 0.31
CHRNA3P32297 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.99■□□□□ 0.31
CHRNA3P32297 AC099522.2-201ENST00000607001 744 ntBASIC16.99■□□□□ 0.31
CHRNA3P32297 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHRNA3P32297 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.99■□□□□ 0.31
CHRNA3P32297 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CHRNA3P32297 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.99■□□□□ 0.31
CHRNA3P32297 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.99■□□□□ 0.31
CHRNA3P32297 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.99■□□□□ 0.31
CHRNA3P32297 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CHRNA3P32297 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CHRNA3P32297 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHRNA3P32297 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHRNA3P32297 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CHRNA3P32297 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.98■□□□□ 0.31
CHRNA3P32297 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA3P32297 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.98■□□□□ 0.31
CHRNA3P32297 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.98■□□□□ 0.31
CHRNA3P32297 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA3P32297 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA3P32297 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
CHRNA3P32297 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CHRNA3P32297 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA3P32297 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA3P32297 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA3P32297 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.98■□□□□ 0.31
CHRNA3P32297 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA3P32297 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA3P32297 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA3P32297 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA3P32297 AL671277.1-201ENST00000429656 993 ntBASIC16.98■□□□□ 0.31
CHRNA3P32297 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.98■□□□□ 0.31
CHRNA3P32297 AP000344.2-201ENST00000512987 629 ntBASIC16.98■□□□□ 0.31
CHRNA3P32297 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.98■□□□□ 0.31
CHRNA3P32297 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.98■□□□□ 0.31
CHRNA3P32297 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.98■□□□□ 0.31
CHRNA3P32297 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
CHRNA3P32297 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.98■□□□□ 0.31
CHRNA3P32297 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.98■□□□□ 0.31
CHRNA3P32297 AL009183.1-201ENST00000603760 355 ntBASIC16.98■□□□□ 0.31
CHRNA3P32297 AC105339.1-204ENST00000636249 355 ntBASIC16.98■□□□□ 0.31
CHRNA3P32297 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.98■□□□□ 0.31
CHRNA3P32297 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CHRNA3P32297 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.98■□□□□ 0.31
CHRNA3P32297 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.98■□□□□ 0.31
CHRNA3P32297 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.98■□□□□ 0.31
CHRNA3P32297 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA3P32297 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA3P32297 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA3P32297 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.98■□□□□ 0.31
CHRNA3P32297 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA3P32297 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.98■□□□□ 0.31
CHRNA3P32297 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA3P32297 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.97■□□□□ 0.31
CHRNA3P32297 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CHRNA3P32297 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA3P32297 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA3P32297 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA3P32297 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.97■□□□□ 0.31
CHRNA3P32297 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms