Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.29□□□□□ -0.12
CTLA4P16410 SPDYE9P-201ENST00000570642 692 ntBASIC14.29□□□□□ -0.12
CTLA4P16410 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.29□□□□□ -0.12
CTLA4P16410 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.29□□□□□ -0.12
CTLA4P16410 AC026120.1-201ENST00000611536 926 ntBASIC14.29□□□□□ -0.12
CTLA4P16410 SPDYE10P-202ENST00000612005 668 ntBASIC14.29□□□□□ -0.12
CTLA4P16410 SPDYE8P-202ENST00000612377 668 ntBASIC14.29□□□□□ -0.12
CTLA4P16410 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
CTLA4P16410 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CTLA4P16410 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CTLA4P16410 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.29□□□□□ -0.12
CTLA4P16410 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CTLA4P16410 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.29□□□□□ -0.12
CTLA4P16410 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CTLA4P16410 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CTLA4P16410 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.29□□□□□ -0.12
CTLA4P16410 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CTLA4P16410 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CTLA4P16410 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.29□□□□□ -0.12
CTLA4P16410 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.29□□□□□ -0.12
CTLA4P16410 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CTLA4P16410 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.29□□□□□ -0.12
CTLA4P16410 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CTLA4P16410 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CTLA4P16410 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.29□□□□□ -0.12
CTLA4P16410 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.29□□□□□ -0.12
CTLA4P16410 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CTLA4P16410 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CTLA4P16410 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CTLA4P16410 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CTLA4P16410 AC144831.1-201ENST00000573312 2656 ntBASIC14.28□□□□□ -0.12
CTLA4P16410 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CTLA4P16410 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CTLA4P16410 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CTLA4P16410 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CTLA4P16410 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CTLA4P16410 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CTLA4P16410 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CTLA4P16410 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CTLA4P16410 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CTLA4P16410 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CTLA4P16410 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CTLA4P16410 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CTLA4P16410 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
CTLA4P16410 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CTLA4P16410 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CTLA4P16410 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.28□□□□□ -0.12
CTLA4P16410 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.28□□□□□ -0.12
CTLA4P16410 AC079140.1-201ENST00000508039 487 ntBASIC14.28□□□□□ -0.12
CTLA4P16410 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
CTLA4P16410 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.28□□□□□ -0.12
CTLA4P16410 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.28□□□□□ -0.12
CTLA4P16410 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
CTLA4P16410 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.28□□□□□ -0.12
CTLA4P16410 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.28□□□□□ -0.12
CTLA4P16410 AP000842.3-202ENST00000569238 1080 ntBASIC14.28□□□□□ -0.12
CTLA4P16410 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.28□□□□□ -0.12
CTLA4P16410 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.28□□□□□ -0.12
CTLA4P16410 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CTLA4P16410 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.28□□□□□ -0.12
CTLA4P16410 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.28□□□□□ -0.12
CTLA4P16410 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CTLA4P16410 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
CTLA4P16410 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.28□□□□□ -0.12
CTLA4P16410 C20orf181-201ENST00000623918 480 ntBASIC14.28□□□□□ -0.12
CTLA4P16410 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.28□□□□□ -0.12
CTLA4P16410 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CTLA4P16410 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.28□□□□□ -0.12
CTLA4P16410 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CTLA4P16410 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CTLA4P16410 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CTLA4P16410 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CTLA4P16410 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CTLA4P16410 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CTLA4P16410 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.27□□□□□ -0.12
CTLA4P16410 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
CTLA4P16410 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.27□□□□□ -0.12
CTLA4P16410 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CTLA4P16410 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.27□□□□□ -0.12
CTLA4P16410 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.27□□□□□ -0.12
CTLA4P16410 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.27□□□□□ -0.12
CTLA4P16410 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CTLA4P16410 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CTLA4P16410 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.27□□□□□ -0.12
CTLA4P16410 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
CTLA4P16410 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.27□□□□□ -0.12
CTLA4P16410 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
CTLA4P16410 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CTLA4P16410 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.27□□□□□ -0.12
CTLA4P16410 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CTLA4P16410 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CTLA4P16410 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CTLA4P16410 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
CTLA4P16410 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.27□□□□□ -0.12
CTLA4P16410 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.27□□□□□ -0.12
CTLA4P16410 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.27□□□□□ -0.13
CTLA4P16410 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CTLA4P16410 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CTLA4P16410 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CTLA4P16410 MIR346-201ENST00000362234 95 ntBASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms