Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.74■□□□□ 0.11
CDH1P12830 AL513210.1-201ENST00000629608 234 ntBASIC15.74■□□□□ 0.11
CDH1P12830 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
CDH1P12830 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH1P12830 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH1P12830 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
CDH1P12830 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
CDH1P12830 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDH1P12830 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.74■□□□□ 0.11
CDH1P12830 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.74■□□□□ 0.11
CDH1P12830 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDH1P12830 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CDH1P12830 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.74■□□□□ 0.11
CDH1P12830 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.74■□□□□ 0.11
CDH1P12830 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH1P12830 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.74■□□□□ 0.11
CDH1P12830 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.74■□□□□ 0.11
CDH1P12830 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH1P12830 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDH1P12830 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH1P12830 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH1P12830 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH1P12830 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDH1P12830 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.74■□□□□ 0.11
CDH1P12830 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CDH1P12830 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.73■□□□□ 0.11
CDH1P12830 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDH1P12830 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.73■□□□□ 0.11
CDH1P12830 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH1P12830 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDH1P12830 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH1P12830 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
CDH1P12830 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH1P12830 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.73■□□□□ 0.11
CDH1P12830 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH1P12830 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDH1P12830 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH1P12830 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.73■□□□□ 0.11
CDH1P12830 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.73■□□□□ 0.11
CDH1P12830 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.73■□□□□ 0.11
CDH1P12830 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH1P12830 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH1P12830 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH1P12830 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDH1P12830 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.73■□□□□ 0.11
CDH1P12830 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH1P12830 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH1P12830 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.73■□□□□ 0.11
CDH1P12830 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH1P12830 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
CDH1P12830 AC142381.1-201ENST00000426099 345 ntBASIC15.73■□□□□ 0.11
CDH1P12830 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.73■□□□□ 0.11
CDH1P12830 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.73■□□□□ 0.11
CDH1P12830 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.73■□□□□ 0.11
CDH1P12830 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH1P12830 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.73■□□□□ 0.11
CDH1P12830 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.73■□□□□ 0.11
CDH1P12830 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
CDH1P12830 SPTSSB-204ENST00000617024 1292 ntBASIC15.73■□□□□ 0.11
CDH1P12830 AC055717.3-201ENST00000622967 595 ntBASIC15.73■□□□□ 0.11
CDH1P12830 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.73■□□□□ 0.11
CDH1P12830 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH1P12830 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH1P12830 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH1P12830 DBET-201ENST00000630918 3363 ntBASIC15.73■□□□□ 0.11
CDH1P12830 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDH1P12830 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.73■□□□□ 0.11
CDH1P12830 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.73■□□□□ 0.11
CDH1P12830 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH1P12830 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDH1P12830 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH1P12830 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.72■□□□□ 0.11
CDH1P12830 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH1P12830 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH1P12830 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH1P12830 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH1P12830 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.72■□□□□ 0.11
CDH1P12830 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.72■□□□□ 0.11
CDH1P12830 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.72■□□□□ 0.11
CDH1P12830 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CDH1P12830 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.72■□□□□ 0.11
CDH1P12830 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH1P12830 AC022532.1-201ENST00000624563 1728 ntBASIC15.72■□□□□ 0.11
CDH1P12830 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH1P12830 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.72■□□□□ 0.11
CDH1P12830 PKD1P5-201ENST00000532415 10291 ntBASIC15.72■□□□□ 0.11
CDH1P12830 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
CDH1P12830 AC004461.1-201ENST00000412461 403 ntBASIC15.72■□□□□ 0.11
CDH1P12830 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.72■□□□□ 0.11
CDH1P12830 AC005237.2-201ENST00000434368 219 ntBASIC15.72■□□□□ 0.11
CDH1P12830 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.72■□□□□ 0.11
CDH1P12830 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.72■□□□□ 0.11
CDH1P12830 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.72■□□□□ 0.11
CDH1P12830 KRT8P23-201ENST00000560090 1207 ntBASIC15.72■□□□□ 0.11
CDH1P12830 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.72■□□□□ 0.11
CDH1P12830 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.72■□□□□ 0.11
CDH1P12830 AC134684.3-201ENST00000641758 218 ntBASIC15.72■□□□□ 0.11
CDH1P12830 LINC02228-204ENST00000642115 2962 ntBASIC15.72■□□□□ 0.11
CDH1P12830 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDH1P12830 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms