Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.91■□□□□ 0.14
CAPN1P07384 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CAPN1P07384 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CAPN1P07384 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CAPN1P07384 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.91■□□□□ 0.14
CAPN1P07384 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.91■□□□□ 0.14
CAPN1P07384 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.91■□□□□ 0.14
CAPN1P07384 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.91■□□□□ 0.14
CAPN1P07384 MIR3909-201ENST00000579518 119 ntBASIC15.91■□□□□ 0.14
CAPN1P07384 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.91■□□□□ 0.14
CAPN1P07384 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CAPN1P07384 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.91■□□□□ 0.14
CAPN1P07384 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CAPN1P07384 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
CAPN1P07384 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.91■□□□□ 0.14
CAPN1P07384 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
CAPN1P07384 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CAPN1P07384 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CAPN1P07384 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CAPN1P07384 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.91■□□□□ 0.14
CAPN1P07384 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
CAPN1P07384 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.91■□□□□ 0.14
CAPN1P07384 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.91■□□□□ 0.14
CAPN1P07384 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CAPN1P07384 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CAPN1P07384 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.91■□□□□ 0.14
CAPN1P07384 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CAPN1P07384 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CAPN1P07384 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.9■□□□□ 0.14
CAPN1P07384 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CAPN1P07384 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.9■□□□□ 0.14
CAPN1P07384 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.9■□□□□ 0.14
CAPN1P07384 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CAPN1P07384 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CAPN1P07384 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
CAPN1P07384 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
CAPN1P07384 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CAPN1P07384 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
CAPN1P07384 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CAPN1P07384 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CAPN1P07384 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CAPN1P07384 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CAPN1P07384 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CAPN1P07384 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CAPN1P07384 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CAPN1P07384 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CAPN1P07384 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.9■□□□□ 0.14
CAPN1P07384 TIMM8BP1-201ENST00000452384 211 ntBASIC15.9■□□□□ 0.14
CAPN1P07384 AC109322.1-201ENST00000524499 1264 ntBASIC15.9■□□□□ 0.14
CAPN1P07384 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.9■□□□□ 0.14
CAPN1P07384 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.9■□□□□ 0.14
CAPN1P07384 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CAPN1P07384 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CAPN1P07384 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CAPN1P07384 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.9■□□□□ 0.14
CAPN1P07384 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CAPN1P07384 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.9■□□□□ 0.14
CAPN1P07384 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CAPN1P07384 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CAPN1P07384 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CAPN1P07384 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CAPN1P07384 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.9■□□□□ 0.14
CAPN1P07384 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.9■□□□□ 0.14
CAPN1P07384 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CAPN1P07384 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CAPN1P07384 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CAPN1P07384 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CAPN1P07384 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CAPN1P07384 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.9■□□□□ 0.14
CAPN1P07384 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CAPN1P07384 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CAPN1P07384 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
CAPN1P07384 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CAPN1P07384 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.9■□□□□ 0.14
CAPN1P07384 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.9■□□□□ 0.14
CAPN1P07384 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CAPN1P07384 AC126755.1-201ENST00000525846 6405 ntBASIC15.9■□□□□ 0.14
CAPN1P07384 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
CAPN1P07384 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.89■□□□□ 0.13
CAPN1P07384 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CAPN1P07384 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CAPN1P07384 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CAPN1P07384 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CAPN1P07384 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
CAPN1P07384 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CAPN1P07384 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CAPN1P07384 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CAPN1P07384 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.89■□□□□ 0.13
CAPN1P07384 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.89■□□□□ 0.13
CAPN1P07384 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CAPN1P07384 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CAPN1P07384 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CAPN1P07384 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CAPN1P07384 LINC00554-201ENST00000564841 3011 ntBASIC15.89■□□□□ 0.13
CAPN1P07384 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CAPN1P07384 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
CAPN1P07384 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.89■□□□□ 0.13
CAPN1P07384 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
CAPN1P07384 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CAPN1P07384 AC023141.5-201ENST00000458585 616 ntBASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 258.4 ms