Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CTSDP07339 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.42□□□□□ -0.26
CTSDP07339 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
CTSDP07339 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.42□□□□□ -0.26
CTSDP07339 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.42□□□□□ -0.26
CTSDP07339 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.42□□□□□ -0.26
CTSDP07339 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.42□□□□□ -0.26
CTSDP07339 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CTSDP07339 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.42□□□□□ -0.26
CTSDP07339 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CTSDP07339 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CTSDP07339 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CTSDP07339 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.42□□□□□ -0.26
CTSDP07339 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.42□□□□□ -0.26
CTSDP07339 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.41□□□□□ -0.26
CTSDP07339 AC112693.3-201ENST00000624819 1983 ntBASIC13.41□□□□□ -0.26
CTSDP07339 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CTSDP07339 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CTSDP07339 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CTSDP07339 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CTSDP07339 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CTSDP07339 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CTSDP07339 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.41□□□□□ -0.26
CTSDP07339 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CTSDP07339 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
CTSDP07339 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CTSDP07339 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CTSDP07339 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CTSDP07339 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
CTSDP07339 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CTSDP07339 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CTSDP07339 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CTSDP07339 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CTSDP07339 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC13.41□□□□□ -0.26
CTSDP07339 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC13.41□□□□□ -0.26
CTSDP07339 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC13.41□□□□□ -0.26
CTSDP07339 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC13.41□□□□□ -0.26
CTSDP07339 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC13.41□□□□□ -0.26
CTSDP07339 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC13.41□□□□□ -0.26
CTSDP07339 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.41□□□□□ -0.26
CTSDP07339 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CTSDP07339 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC13.41□□□□□ -0.26
CTSDP07339 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC13.41□□□□□ -0.26
CTSDP07339 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CTSDP07339 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC13.41□□□□□ -0.26
CTSDP07339 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC13.41□□□□□ -0.26
CTSDP07339 AL365330.1-201ENST00000607459 531 ntBASIC13.41□□□□□ -0.26
CTSDP07339 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC13.41□□□□□ -0.26
CTSDP07339 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.41□□□□□ -0.26
CTSDP07339 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.41□□□□□ -0.26
CTSDP07339 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CTSDP07339 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CTSDP07339 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CTSDP07339 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.41□□□□□ -0.26
CTSDP07339 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CTSDP07339 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CTSDP07339 CYP51A1P2-201ENST00000419457 1499 ntBASIC13.41□□□□□ -0.26
CTSDP07339 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CTSDP07339 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CTSDP07339 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CTSDP07339 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CTSDP07339 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CTSDP07339 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CTSDP07339 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CTSDP07339 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CTSDP07339 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.4□□□□□ -0.26
CTSDP07339 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CTSDP07339 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
CTSDP07339 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CTSDP07339 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CTSDP07339 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CTSDP07339 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.4□□□□□ -0.26
CTSDP07339 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
CTSDP07339 AC106881.1-201ENST00000605849 3329 ntBASIC13.4□□□□□ -0.26
CTSDP07339 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CTSDP07339 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CTSDP07339 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CTSDP07339 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CTSDP07339 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CTSDP07339 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CTSDP07339 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CTSDP07339 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CTSDP07339 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CTSDP07339 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.4□□□□□ -0.26
CTSDP07339 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CTSDP07339 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CTSDP07339 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC13.4□□□□□ -0.26
CTSDP07339 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.4□□□□□ -0.26
CTSDP07339 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CTSDP07339 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC13.4□□□□□ -0.26
CTSDP07339 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC13.4□□□□□ -0.26
CTSDP07339 AC006557.2-201ENST00000592985 1240 ntBASIC13.4□□□□□ -0.26
CTSDP07339 AC138894.3-201ENST00000603787 634 ntBASIC13.4□□□□□ -0.26
CTSDP07339 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC13.4□□□□□ -0.26
CTSDP07339 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CTSDP07339 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CTSDP07339 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CTSDP07339 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CTSDP07339 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC13.4□□□□□ -0.26
CTSDP07339 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms