Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 AC008677.1-201ENST00000519230 1561 ntBASIC16.17■□□□□ 0.18
APOA4P06727 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
APOA4P06727 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.17■□□□□ 0.18
APOA4P06727 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
APOA4P06727 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
APOA4P06727 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
APOA4P06727 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.16■□□□□ 0.18
APOA4P06727 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
APOA4P06727 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.16■□□□□ 0.18
APOA4P06727 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
APOA4P06727 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
APOA4P06727 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
APOA4P06727 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
APOA4P06727 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
APOA4P06727 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.16■□□□□ 0.18
APOA4P06727 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
APOA4P06727 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
APOA4P06727 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.16■□□□□ 0.18
APOA4P06727 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
APOA4P06727 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.16■□□□□ 0.18
APOA4P06727 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
APOA4P06727 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
APOA4P06727 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
APOA4P06727 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
APOA4P06727 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.16■□□□□ 0.18
APOA4P06727 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
APOA4P06727 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
APOA4P06727 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
APOA4P06727 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
APOA4P06727 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.16■□□□□ 0.18
APOA4P06727 TFAMP1-201ENST00000412727 736 ntBASIC16.16■□□□□ 0.18
APOA4P06727 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
APOA4P06727 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.16■□□□□ 0.18
APOA4P06727 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.16■□□□□ 0.18
APOA4P06727 SPDYE11-202ENST00000450699 704 ntBASIC16.16■□□□□ 0.18
APOA4P06727 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.16■□□□□ 0.18
APOA4P06727 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
APOA4P06727 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
APOA4P06727 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
APOA4P06727 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
APOA4P06727 AL135744.1-201ENST00000565098 629 ntBASIC16.16■□□□□ 0.18
APOA4P06727 SPDYE9P-201ENST00000570642 692 ntBASIC16.16■□□□□ 0.18
APOA4P06727 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
APOA4P06727 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.16■□□□□ 0.18
APOA4P06727 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.16■□□□□ 0.18
APOA4P06727 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.16■□□□□ 0.18
APOA4P06727 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.16■□□□□ 0.18
APOA4P06727 SPDYE10P-202ENST00000612005 668 ntBASIC16.16■□□□□ 0.18
APOA4P06727 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
APOA4P06727 SPDYE8P-202ENST00000612377 668 ntBASIC16.16■□□□□ 0.18
APOA4P06727 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.16■□□□□ 0.18
APOA4P06727 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.16■□□□□ 0.18
APOA4P06727 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
APOA4P06727 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.16■□□□□ 0.18
APOA4P06727 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
APOA4P06727 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
APOA4P06727 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
APOA4P06727 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
APOA4P06727 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.16■□□□□ 0.18
APOA4P06727 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
APOA4P06727 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.15■□□□□ 0.18
APOA4P06727 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
APOA4P06727 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
APOA4P06727 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
APOA4P06727 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
APOA4P06727 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
APOA4P06727 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.15■□□□□ 0.18
APOA4P06727 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
APOA4P06727 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
APOA4P06727 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
APOA4P06727 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
APOA4P06727 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.15■□□□□ 0.18
APOA4P06727 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
APOA4P06727 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
APOA4P06727 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
APOA4P06727 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
APOA4P06727 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
APOA4P06727 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.15■□□□□ 0.18
APOA4P06727 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
APOA4P06727 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
APOA4P06727 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.15■□□□□ 0.18
APOA4P06727 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
APOA4P06727 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
APOA4P06727 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.15■□□□□ 0.18
APOA4P06727 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
APOA4P06727 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.15■□□□□ 0.18
APOA4P06727 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.15■□□□□ 0.18
APOA4P06727 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
APOA4P06727 ALG1L5P-201ENST00000482043 771 ntBASIC16.15■□□□□ 0.18
APOA4P06727 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.15■□□□□ 0.18
APOA4P06727 PRYP6-201ENST00000514804 343 ntBASIC16.15■□□□□ 0.18
APOA4P06727 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.15■□□□□ 0.18
APOA4P06727 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.15■□□□□ 0.18
APOA4P06727 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
APOA4P06727 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.15■□□□□ 0.18
APOA4P06727 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
APOA4P06727 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
APOA4P06727 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.15■□□□□ 0.18
APOA4P06727 AC073439.1-201ENST00000624121 1774 ntBASIC16.15■□□□□ 0.18
APOA4P06727 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms