Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD74P04233 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD74P04233 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD74P04233 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC13.57□□□□□ -0.24
CD74P04233 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CD74P04233 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD74P04233 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD74P04233 WASH6P-202ENST00000359512 1437 ntBASIC13.56□□□□□ -0.24
CD74P04233 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD74P04233 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD74P04233 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD74P04233 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CD74P04233 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
CD74P04233 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD74P04233 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.56□□□□□ -0.24
CD74P04233 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD74P04233 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CD74P04233 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CD74P04233 GUK1-204ENST00000366721 689 ntTSL 3 BASIC13.56□□□□□ -0.24
CD74P04233 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CD74P04233 RCN1P1-201ENST00000400413 996 ntBASIC13.56□□□□□ -0.24
CD74P04233 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CD74P04233 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC13.56□□□□□ -0.24
CD74P04233 NUS1P2-201ENST00000417358 873 ntBASIC13.56□□□□□ -0.24
CD74P04233 RBM17P3-201ENST00000417687 1192 ntBASIC13.56□□□□□ -0.24
CD74P04233 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC13.56□□□□□ -0.24
CD74P04233 DUX4L26-201ENST00000489078 1255 ntBASIC13.56□□□□□ -0.24
CD74P04233 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CD74P04233 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC13.56□□□□□ -0.24
CD74P04233 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
CD74P04233 AC012615.1-201ENST00000565797 1299 ntBASIC13.56□□□□□ -0.24
CD74P04233 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC13.56□□□□□ -0.24
CD74P04233 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC13.56□□□□□ -0.24
CD74P04233 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CD74P04233 METTL23-204ENST00000586752 904 ntTSL 2 BASIC13.56□□□□□ -0.24
CD74P04233 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CD74P04233 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC13.56□□□□□ -0.24
CD74P04233 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC13.56□□□□□ -0.24
CD74P04233 AC099336.1-202ENST00000602961 463 ntBASIC13.56□□□□□ -0.24
CD74P04233 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CD74P04233 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD74P04233 AC005912.2-201ENST00000619492 2400 ntBASIC13.56□□□□□ -0.24
CD74P04233 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.56□□□□□ -0.24
CD74P04233 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.56□□□□□ -0.24
CD74P04233 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
CD74P04233 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CD74P04233 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC13.56□□□□□ -0.24
CD74P04233 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CD74P04233 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD74P04233 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.56□□□□□ -0.24
CD74P04233 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD74P04233 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD74P04233 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD74P04233 AC009090.5-201ENST00000624886 2285 ntBASIC13.56□□□□□ -0.24
CD74P04233 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CD74P04233 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CD74P04233 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD74P04233 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD74P04233 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD74P04233 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD74P04233 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CD74P04233 CYP51A1P2-201ENST00000419457 1499 ntBASIC13.55□□□□□ -0.24
CD74P04233 MED25-212ENST00000618715 1467 ntTSL 5 BASIC13.55□□□□□ -0.24
CD74P04233 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CD74P04233 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CD74P04233 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD74P04233 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC13.55□□□□□ -0.24
CD74P04233 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD74P04233 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD74P04233 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CD74P04233 C8orf49-201ENST00000525043 1968 ntBASIC13.55□□□□□ -0.24
CD74P04233 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD74P04233 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.55□□□□□ -0.24
CD74P04233 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
CD74P04233 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC13.55□□□□□ -0.24
CD74P04233 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD74P04233 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD74P04233 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD74P04233 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CD74P04233 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC13.55□□□□□ -0.24
CD74P04233 FICD-205ENST00000552758 603 ntTSL 2 BASIC13.55□□□□□ -0.24
CD74P04233 MIR3909-201ENST00000579518 119 ntBASIC13.55□□□□□ -0.24
CD74P04233 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
CD74P04233 GGTLC5P-201ENST00000617623 998 ntBASIC13.55□□□□□ -0.24
CD74P04233 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD74P04233 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CD74P04233 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.55□□□□□ -0.24
CD74P04233 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.55□□□□□ -0.24
CD74P04233 AC139749.1-202ENST00000617529 3139 ntBASIC13.55□□□□□ -0.24
CD74P04233 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.55□□□□□ -0.24
CD74P04233 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
CD74P04233 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.55□□□□□ -0.24
CD74P04233 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CD74P04233 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD74P04233 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CD74P04233 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD74P04233 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CD74P04233 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD74P04233 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CD74P04233 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms