Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRBV12-3P01733 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
TRBV12-3P01733 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRBV12-3P01733 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRBV12-3P01733 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRBV12-3P01733 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRBV12-3P01733 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRBV12-3P01733 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
TRBV12-3P01733 AC069224.1-201ENST00000566372 1715 ntBASIC12.45□□□□□ -0.42
TRBV12-3P01733 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC12.45□□□□□ -0.42
TRBV12-3P01733 AC132872.4-202ENST00000622924 2756 ntBASIC12.45□□□□□ -0.42
TRBV12-3P01733 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRBV12-3P01733 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRBV12-3P01733 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRBV12-3P01733 PAUPAR-201ENST00000630360 2965 ntBASIC12.45□□□□□ -0.42
TRBV12-3P01733 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRBV12-3P01733 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRBV12-3P01733 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC12.45□□□□□ -0.42
TRBV12-3P01733 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
TRBV12-3P01733 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC12.45□□□□□ -0.42
TRBV12-3P01733 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRBV12-3P01733 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TRBV12-3P01733 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TRBV12-3P01733 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRBV12-3P01733 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRBV12-3P01733 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRBV12-3P01733 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC12.44□□□□□ -0.42
TRBV12-3P01733 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRBV12-3P01733 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRBV12-3P01733 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TRBV12-3P01733 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC12.44□□□□□ -0.42
TRBV12-3P01733 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRBV12-3P01733 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
TRBV12-3P01733 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRBV12-3P01733 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC12.44□□□□□ -0.42
TRBV12-3P01733 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TRBV12-3P01733 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRBV12-3P01733 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
TRBV12-3P01733 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRBV12-3P01733 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
TRBV12-3P01733 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
TRBV12-3P01733 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC12.44□□□□□ -0.42
TRBV12-3P01733 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
TRBV12-3P01733 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC12.44□□□□□ -0.42
TRBV12-3P01733 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC12.44□□□□□ -0.42
TRBV12-3P01733 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC12.44□□□□□ -0.42
TRBV12-3P01733 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC12.44□□□□□ -0.42
TRBV12-3P01733 FAM86GP-201ENST00000448322 971 ntBASIC12.44□□□□□ -0.42
TRBV12-3P01733 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC12.44□□□□□ -0.42
TRBV12-3P01733 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRBV12-3P01733 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC12.44□□□□□ -0.42
TRBV12-3P01733 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TRBV12-3P01733 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRBV12-3P01733 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TRBV12-3P01733 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRBV12-3P01733 HYMAI-201ENST00000635591 3347 ntBASIC12.44□□□□□ -0.42
TRBV12-3P01733 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRBV12-3P01733 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TRBV12-3P01733 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
TRBV12-3P01733 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRBV12-3P01733 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRBV12-3P01733 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC12.44□□□□□ -0.42
TRBV12-3P01733 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRBV12-3P01733 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC12.44□□□□□ -0.42
TRBV12-3P01733 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRBV12-3P01733 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC12.44□□□□□ -0.42
TRBV12-3P01733 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
TRBV12-3P01733 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRBV12-3P01733 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRBV12-3P01733 FUK-207ENST00000571514 3054 ntTSL 2 BASIC12.43□□□□□ -0.42
TRBV12-3P01733 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC12.43□□□□□ -0.42
TRBV12-3P01733 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC12.43□□□□□ -0.42
TRBV12-3P01733 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TRBV12-3P01733 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRBV12-3P01733 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRBV12-3P01733 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRBV12-3P01733 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
TRBV12-3P01733 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRBV12-3P01733 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRBV12-3P01733 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRBV12-3P01733 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC12.43□□□□□ -0.42
TRBV12-3P01733 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
TRBV12-3P01733 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRBV12-3P01733 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRBV12-3P01733 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TRBV12-3P01733 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TRBV12-3P01733 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRBV12-3P01733 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TRBV12-3P01733 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRBV12-3P01733 WRB-204ENST00000398753 699 ntTSL 3 BASIC12.43□□□□□ -0.42
TRBV12-3P01733 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRBV12-3P01733 HLA-DRB6-201ENST00000411500 1235 ntBASIC12.43□□□□□ -0.42
TRBV12-3P01733 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRBV12-3P01733 KLF2P3-201ENST00000451977 1087 ntBASIC12.43□□□□□ -0.42
TRBV12-3P01733 AL139010.1-201ENST00000454878 894 ntBASIC12.43□□□□□ -0.42
TRBV12-3P01733 DUX4L27-201ENST00000554796 1261 ntBASIC12.43□□□□□ -0.42
TRBV12-3P01733 AC051619.7-201ENST00000568314 623 ntBASIC12.43□□□□□ -0.42
TRBV12-3P01733 LITAF-210ENST00000571976 548 ntTSL 2 BASIC12.43□□□□□ -0.42
TRBV12-3P01733 LITAF-214ENST00000574703 486 ntTSL 2 BASIC12.43□□□□□ -0.42
TRBV12-3P01733 RN7SL828P-201ENST00000607615 303 ntBASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms