Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TOP3BO95985 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.54■□□□□ 0.24
TOP3BO95985 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TOP3BO95985 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TOP3BO95985 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.54■□□□□ 0.24
TOP3BO95985 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.54■□□□□ 0.24
TOP3BO95985 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
TOP3BO95985 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.54■□□□□ 0.24
TOP3BO95985 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.54■□□□□ 0.24
TOP3BO95985 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.54■□□□□ 0.24
TOP3BO95985 IGHV3-71-201ENST00000523324 359 ntBASIC16.54■□□□□ 0.24
TOP3BO95985 FAM86C2P-203ENST00000528684 1004 ntBASIC16.54■□□□□ 0.24
TOP3BO95985 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.54■□□□□ 0.24
TOP3BO95985 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TOP3BO95985 AC026150.2-201ENST00000564693 1156 ntBASIC16.54■□□□□ 0.24
TOP3BO95985 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TOP3BO95985 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.54■□□□□ 0.24
TOP3BO95985 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TOP3BO95985 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.54■□□□□ 0.24
TOP3BO95985 AP002414.2-201ENST00000591780 3365 ntBASIC16.54■□□□□ 0.24
TOP3BO95985 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TOP3BO95985 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TOP3BO95985 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TOP3BO95985 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TOP3BO95985 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TOP3BO95985 KRT8P39-201ENST00000396270 1433 ntBASIC16.53■□□□□ 0.24
TOP3BO95985 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.53■□□□□ 0.24
TOP3BO95985 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.53■□□□□ 0.24
TOP3BO95985 AC131009.4-201ENST00000624048 1740 ntBASIC16.53■□□□□ 0.24
TOP3BO95985 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TOP3BO95985 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TOP3BO95985 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TOP3BO95985 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TOP3BO95985 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TOP3BO95985 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TOP3BO95985 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TOP3BO95985 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TOP3BO95985 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.53■□□□□ 0.24
TOP3BO95985 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TOP3BO95985 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.53■□□□□ 0.24
TOP3BO95985 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TOP3BO95985 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
TOP3BO95985 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
TOP3BO95985 MRPS18AP1-201ENST00000414458 589 ntBASIC16.53■□□□□ 0.24
TOP3BO95985 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.53■□□□□ 0.24
TOP3BO95985 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.53■□□□□ 0.24
TOP3BO95985 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC16.53■□□□□ 0.24
TOP3BO95985 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.53■□□□□ 0.24
TOP3BO95985 HILS1-202ENST00000545329 423 ntBASIC16.53■□□□□ 0.24
TOP3BO95985 IFT20-216ENST00000588477 774 ntTSL 5 BASIC16.53■□□□□ 0.24
TOP3BO95985 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TOP3BO95985 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
TOP3BO95985 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
TOP3BO95985 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TOP3BO95985 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
TOP3BO95985 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TOP3BO95985 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TOP3BO95985 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.53■□□□□ 0.24
TOP3BO95985 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TOP3BO95985 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TOP3BO95985 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TOP3BO95985 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TOP3BO95985 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TOP3BO95985 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
TOP3BO95985 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
TOP3BO95985 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
TOP3BO95985 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TOP3BO95985 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TOP3BO95985 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.52■□□□□ 0.24
TOP3BO95985 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.52■□□□□ 0.24
TOP3BO95985 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
TOP3BO95985 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TOP3BO95985 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
TOP3BO95985 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TOP3BO95985 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.52■□□□□ 0.24
TOP3BO95985 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TOP3BO95985 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC16.52■□□□□ 0.24
TOP3BO95985 PIN1P1-201ENST00000412108 996 ntBASIC16.52■□□□□ 0.24
TOP3BO95985 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
TOP3BO95985 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TOP3BO95985 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.52■□□□□ 0.24
TOP3BO95985 AC107918.2-201ENST00000530817 355 ntBASIC16.52■□□□□ 0.24
TOP3BO95985 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
TOP3BO95985 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TOP3BO95985 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC16.52■□□□□ 0.24
TOP3BO95985 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.52■□□□□ 0.24
TOP3BO95985 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.52■□□□□ 0.24
TOP3BO95985 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC16.52■□□□□ 0.24
TOP3BO95985 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.52■□□□□ 0.24
TOP3BO95985 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.52■□□□□ 0.24
TOP3BO95985 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.52■□□□□ 0.24
TOP3BO95985 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TOP3BO95985 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TOP3BO95985 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TOP3BO95985 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.52■□□□□ 0.24
TOP3BO95985 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.52■□□□□ 0.24
TOP3BO95985 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.52■□□□□ 0.24
TOP3BO95985 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
TOP3BO95985 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TOP3BO95985 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms