Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CLSTN1O94985 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLSTN1O94985 PMS2P4-201ENST00000412466 1052 ntBASIC17.9■□□□□ 0.46
CLSTN1O94985 AC004832.2-201ENST00000426397 482 ntBASIC17.9■□□□□ 0.46
CLSTN1O94985 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.9■□□□□ 0.46
CLSTN1O94985 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
CLSTN1O94985 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.9■□□□□ 0.46
CLSTN1O94985 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.9■□□□□ 0.46
CLSTN1O94985 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.9■□□□□ 0.46
CLSTN1O94985 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.9■□□□□ 0.46
CLSTN1O94985 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.9■□□□□ 0.46
CLSTN1O94985 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLSTN1O94985 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLSTN1O94985 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CLSTN1O94985 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
CLSTN1O94985 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLSTN1O94985 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLSTN1O94985 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLSTN1O94985 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLSTN1O94985 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CLSTN1O94985 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.9■□□□□ 0.46
CLSTN1O94985 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLSTN1O94985 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLSTN1O94985 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CLSTN1O94985 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CLSTN1O94985 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLSTN1O94985 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLSTN1O94985 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLSTN1O94985 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
CLSTN1O94985 AC016027.1-202ENST00000607927 1699 ntBASIC17.9■□□□□ 0.46
CLSTN1O94985 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.9■□□□□ 0.46
CLSTN1O94985 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
CLSTN1O94985 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
CLSTN1O94985 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.89■□□□□ 0.45
CLSTN1O94985 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.89■□□□□ 0.45
CLSTN1O94985 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CLSTN1O94985 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLSTN1O94985 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
CLSTN1O94985 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.89■□□□□ 0.45
CLSTN1O94985 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLSTN1O94985 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLSTN1O94985 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLSTN1O94985 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLSTN1O94985 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CLSTN1O94985 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.89■□□□□ 0.45
CLSTN1O94985 MIR1233-2-201ENST00000408138 82 ntBASIC17.89■□□□□ 0.45
CLSTN1O94985 MIR1233-1-201ENST00000408722 82 ntBASIC17.89■□□□□ 0.45
CLSTN1O94985 CEND1P1-201ENST00000451006 455 ntBASIC17.89■□□□□ 0.45
CLSTN1O94985 TIMM8BP1-201ENST00000452384 211 ntBASIC17.89■□□□□ 0.45
CLSTN1O94985 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLSTN1O94985 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.89■□□□□ 0.45
CLSTN1O94985 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.89■□□□□ 0.45
CLSTN1O94985 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.89■□□□□ 0.45
CLSTN1O94985 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.89■□□□□ 0.45
CLSTN1O94985 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.89■□□□□ 0.45
CLSTN1O94985 AL161645.1-201ENST00000622716 1255 ntBASIC17.89■□□□□ 0.45
CLSTN1O94985 AL139011.1-202ENST00000642063 584 ntBASIC17.89■□□□□ 0.45
CLSTN1O94985 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CLSTN1O94985 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLSTN1O94985 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLSTN1O94985 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.89■□□□□ 0.45
CLSTN1O94985 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLSTN1O94985 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.89■□□□□ 0.45
CLSTN1O94985 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLSTN1O94985 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CLSTN1O94985 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.89■□□□□ 0.45
CLSTN1O94985 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLSTN1O94985 SNX33P1-201ENST00000592116 1762 ntBASIC17.89■□□□□ 0.45
CLSTN1O94985 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.89■□□□□ 0.45
CLSTN1O94985 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLSTN1O94985 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLSTN1O94985 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.88■□□□□ 0.45
CLSTN1O94985 PCGF3-213ENST00000620529 1899 ntBASIC17.88■□□□□ 0.45
CLSTN1O94985 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLSTN1O94985 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CLSTN1O94985 OR2I1P-210ENST00000642037 4691 ntBASIC17.88■□□□□ 0.45
CLSTN1O94985 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.88■□□□□ 0.45
CLSTN1O94985 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CLSTN1O94985 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLSTN1O94985 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLSTN1O94985 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLSTN1O94985 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLSTN1O94985 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLSTN1O94985 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLSTN1O94985 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLSTN1O94985 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CLSTN1O94985 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.88■□□□□ 0.45
CLSTN1O94985 KRT18P34-201ENST00000488218 1270 ntBASIC17.88■□□□□ 0.45
CLSTN1O94985 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLSTN1O94985 AC104640.1-201ENST00000562617 2109 ntBASIC17.88■□□□□ 0.45
CLSTN1O94985 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.88■□□□□ 0.45
CLSTN1O94985 AP002472.1-201ENST00000577490 586 ntBASIC17.88■□□□□ 0.45
CLSTN1O94985 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.88■□□□□ 0.45
CLSTN1O94985 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.88■□□□□ 0.45
CLSTN1O94985 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.88■□□□□ 0.45
CLSTN1O94985 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLSTN1O94985 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLSTN1O94985 GPAA1P2-202ENST00000606848 1787 ntBASIC17.88■□□□□ 0.45
CLSTN1O94985 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLSTN1O94985 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms