Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
GPC4O75487 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.21■□□□□ 0.18
GPC4O75487 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
GPC4O75487 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.21■□□□□ 0.18
GPC4O75487 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
GPC4O75487 AC097376.2-205ENST00000610159 5334 ntBASIC16.21■□□□□ 0.18
GPC4O75487 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
GPC4O75487 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
GPC4O75487 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
GPC4O75487 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
GPC4O75487 AC068418.2-201ENST00000577309 3703 ntBASIC16.2■□□□□ 0.18
GPC4O75487 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
GPC4O75487 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
GPC4O75487 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
GPC4O75487 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
GPC4O75487 AC006449.6-201ENST00000612330 2296 ntBASIC16.2■□□□□ 0.18
GPC4O75487 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GPC4O75487 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.2■□□□□ 0.18
GPC4O75487 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GPC4O75487 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.2■□□□□ 0.18
GPC4O75487 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GPC4O75487 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GPC4O75487 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
GPC4O75487 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GPC4O75487 ADH5P3-201ENST00000433842 1137 ntBASIC16.2■□□□□ 0.18
GPC4O75487 POU5F1P6-201ENST00000466990 990 ntBASIC16.2■□□□□ 0.18
GPC4O75487 KRT18P34-201ENST00000488218 1270 ntBASIC16.2■□□□□ 0.18
GPC4O75487 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.2■□□□□ 0.18
GPC4O75487 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.2■□□□□ 0.18
GPC4O75487 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.2■□□□□ 0.18
GPC4O75487 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.2■□□□□ 0.18
GPC4O75487 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.2■□□□□ 0.18
GPC4O75487 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
GPC4O75487 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
GPC4O75487 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
GPC4O75487 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.2■□□□□ 0.18
GPC4O75487 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.2■□□□□ 0.18
GPC4O75487 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GPC4O75487 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
GPC4O75487 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
GPC4O75487 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.2■□□□□ 0.18
GPC4O75487 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.2■□□□□ 0.18
GPC4O75487 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
GPC4O75487 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GPC4O75487 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
GPC4O75487 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
GPC4O75487 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
GPC4O75487 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.2■□□□□ 0.18
GPC4O75487 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
GPC4O75487 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
GPC4O75487 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
GPC4O75487 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GPC4O75487 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
GPC4O75487 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GPC4O75487 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
GPC4O75487 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GPC4O75487 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.19■□□□□ 0.18
GPC4O75487 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
GPC4O75487 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GPC4O75487 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GPC4O75487 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.19■□□□□ 0.18
GPC4O75487 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GPC4O75487 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GPC4O75487 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC16.19■□□□□ 0.18
GPC4O75487 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
GPC4O75487 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
GPC4O75487 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
GPC4O75487 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
GPC4O75487 AL355306.1-201ENST00000415580 579 ntBASIC16.19■□□□□ 0.18
GPC4O75487 HTR5BP-201ENST00000430851 1154 ntBASIC16.19■□□□□ 0.18
GPC4O75487 ACTG1P14-201ENST00000446382 1122 ntBASIC16.19■□□□□ 0.18
GPC4O75487 DNAJB3-201ENST00000446806 729 ntBASIC16.19■□□□□ 0.18
GPC4O75487 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.19■□□□□ 0.18
GPC4O75487 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
GPC4O75487 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
GPC4O75487 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
GPC4O75487 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.19■□□□□ 0.18
GPC4O75487 RARRES2P8-201ENST00000566335 367 ntBASIC16.19■□□□□ 0.18
GPC4O75487 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.19■□□□□ 0.18
GPC4O75487 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
GPC4O75487 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.19■□□□□ 0.18
GPC4O75487 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GPC4O75487 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
GPC4O75487 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
GPC4O75487 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
GPC4O75487 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GPC4O75487 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
GPC4O75487 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
GPC4O75487 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.19■□□□□ 0.18
GPC4O75487 AL603832.2-201ENST00000566195 2125 ntBASIC16.19■□□□□ 0.18
GPC4O75487 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
GPC4O75487 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GPC4O75487 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GPC4O75487 AKAP8P1-201ENST00000434743 1349 ntBASIC16.19■□□□□ 0.18
GPC4O75487 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.19■□□□□ 0.18
GPC4O75487 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
GPC4O75487 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GPC4O75487 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
GPC4O75487 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
GPC4O75487 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms