Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRCH4O75427 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.72■□□□□ 0.27
LRCH4O75427 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.72■□□□□ 0.27
LRCH4O75427 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRCH4O75427 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.72■□□□□ 0.27
LRCH4O75427 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
LRCH4O75427 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRCH4O75427 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.71■□□□□ 0.27
LRCH4O75427 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
LRCH4O75427 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.71■□□□□ 0.27
LRCH4O75427 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRCH4O75427 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.71■□□□□ 0.27
LRCH4O75427 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.71■□□□□ 0.27
LRCH4O75427 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.71■□□□□ 0.27
LRCH4O75427 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.71■□□□□ 0.27
LRCH4O75427 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
LRCH4O75427 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.71■□□□□ 0.27
LRCH4O75427 RBPMS2P1-201ENST00000437762 623 ntBASIC16.71■□□□□ 0.27
LRCH4O75427 SPDYE14P-201ENST00000442619 822 ntBASIC16.71■□□□□ 0.27
LRCH4O75427 EEF1DP4-201ENST00000446006 880 ntBASIC16.71■□□□□ 0.27
LRCH4O75427 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRCH4O75427 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.71■□□□□ 0.27
LRCH4O75427 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.71■□□□□ 0.27
LRCH4O75427 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRCH4O75427 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.71■□□□□ 0.27
LRCH4O75427 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
LRCH4O75427 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRCH4O75427 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRCH4O75427 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRCH4O75427 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRCH4O75427 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRCH4O75427 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
LRCH4O75427 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRCH4O75427 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRCH4O75427 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRCH4O75427 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRCH4O75427 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRCH4O75427 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.71■□□□□ 0.27
LRCH4O75427 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
LRCH4O75427 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
LRCH4O75427 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.26
LRCH4O75427 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.71■□□□□ 0.26
LRCH4O75427 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
LRCH4O75427 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
LRCH4O75427 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
LRCH4O75427 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRCH4O75427 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRCH4O75427 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRCH4O75427 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRCH4O75427 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRCH4O75427 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRCH4O75427 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRCH4O75427 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.7■□□□□ 0.26
LRCH4O75427 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRCH4O75427 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRCH4O75427 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.7■□□□□ 0.26
LRCH4O75427 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
LRCH4O75427 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.7■□□□□ 0.26
LRCH4O75427 AC023141.5-201ENST00000458585 616 ntBASIC16.7■□□□□ 0.26
LRCH4O75427 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.7■□□□□ 0.26
LRCH4O75427 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.7■□□□□ 0.26
LRCH4O75427 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.7■□□□□ 0.26
LRCH4O75427 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.7■□□□□ 0.26
LRCH4O75427 AC026979.3-201ENST00000607315 403 ntBASIC16.7■□□□□ 0.26
LRCH4O75427 AC018529.1-201ENST00000613063 361 ntBASIC16.7■□□□□ 0.26
LRCH4O75427 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.7■□□□□ 0.26
LRCH4O75427 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.7■□□□□ 0.26
LRCH4O75427 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.7■□□□□ 0.26
LRCH4O75427 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRCH4O75427 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRCH4O75427 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRCH4O75427 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.7■□□□□ 0.26
LRCH4O75427 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.7■□□□□ 0.26
LRCH4O75427 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
LRCH4O75427 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.7■□□□□ 0.26
LRCH4O75427 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRCH4O75427 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.69■□□□□ 0.26
LRCH4O75427 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRCH4O75427 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRCH4O75427 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRCH4O75427 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRCH4O75427 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRCH4O75427 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.69■□□□□ 0.26
LRCH4O75427 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
LRCH4O75427 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRCH4O75427 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
LRCH4O75427 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRCH4O75427 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRCH4O75427 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
LRCH4O75427 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.69■□□□□ 0.26
LRCH4O75427 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.69■□□□□ 0.26
LRCH4O75427 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRCH4O75427 MIR1233-2-201ENST00000408138 82 ntBASIC16.69■□□□□ 0.26
LRCH4O75427 MIR1233-1-201ENST00000408722 82 ntBASIC16.69■□□□□ 0.26
LRCH4O75427 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.69■□□□□ 0.26
LRCH4O75427 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRCH4O75427 AP006288.1-201ENST00000446065 395 ntBASIC16.69■□□□□ 0.26
LRCH4O75427 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.69■□□□□ 0.26
LRCH4O75427 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
LRCH4O75427 AC026150.2-201ENST00000564693 1156 ntBASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms