Protein–RNA interactions for Protein: O15541

RNF113A, RING finger protein 113A, humanhuman

Known RBP Predictions only

Length 343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF113AO15541 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC19.22■□□□□ 0.67
RNF113AO15541 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF113AO15541 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF113AO15541 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC19.22■□□□□ 0.67
RNF113AO15541 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
RNF113AO15541 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF113AO15541 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF113AO15541 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC19.22■□□□□ 0.67
RNF113AO15541 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF113AO15541 AC018695.7-201ENST00000624587 2492 ntBASIC19.22■□□□□ 0.67
RNF113AO15541 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC19.22■□□□□ 0.67
RNF113AO15541 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC19.22■□□□□ 0.67
RNF113AO15541 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF113AO15541 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF113AO15541 MRPS18AP1-201ENST00000414458 589 ntBASIC19.22■□□□□ 0.67
RNF113AO15541 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC19.22■□□□□ 0.67
RNF113AO15541 AC044860.1-202ENST00000559481 777 ntBASIC19.22■□□□□ 0.67
RNF113AO15541 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC19.22■□□□□ 0.67
RNF113AO15541 NAA60-208ENST00000570819 833 ntTSL 2 BASIC19.22■□□□□ 0.67
RNF113AO15541 SSH2-210ENST00000582084 560 ntTSL 3 BASIC19.22■□□□□ 0.67
RNF113AO15541 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC19.22■□□□□ 0.67
RNF113AO15541 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC19.22■□□□□ 0.67
RNF113AO15541 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF113AO15541 CROCCP1-201ENST00000426910 5675 ntBASIC19.22■□□□□ 0.67
RNF113AO15541 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF113AO15541 TNRC18P3-201ENST00000441896 2691 ntBASIC19.22■□□□□ 0.67
RNF113AO15541 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC19.22■□□□□ 0.67
RNF113AO15541 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC19.22■□□□□ 0.67
RNF113AO15541 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF113AO15541 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF113AO15541 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC19.22■□□□□ 0.67
RNF113AO15541 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF113AO15541 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF113AO15541 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC19.21■□□□□ 0.67
RNF113AO15541 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC19.21■□□□□ 0.67
RNF113AO15541 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF113AO15541 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
RNF113AO15541 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF113AO15541 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF113AO15541 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF113AO15541 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC19.21■□□□□ 0.67
RNF113AO15541 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF113AO15541 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF113AO15541 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC19.21■□□□□ 0.67
RNF113AO15541 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF113AO15541 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
RNF113AO15541 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC19.21■□□□□ 0.67
RNF113AO15541 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC19.21■□□□□ 0.67
RNF113AO15541 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
RNF113AO15541 NME4-207ENST00000450036 985 ntTSL 3 BASIC19.21■□□□□ 0.67
RNF113AO15541 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF113AO15541 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC19.21■□□□□ 0.67
RNF113AO15541 INGX-202ENST00000489074 768 ntBASIC19.21■□□□□ 0.67
RNF113AO15541 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC19.21■□□□□ 0.67
RNF113AO15541 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF113AO15541 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC19.21■□□□□ 0.67
RNF113AO15541 SPCS2P1-201ENST00000561636 679 ntBASIC19.21■□□□□ 0.67
RNF113AO15541 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC19.21■□□□□ 0.67
RNF113AO15541 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
RNF113AO15541 AC022144.1-201ENST00000602255 1580 ntBASIC19.21■□□□□ 0.67
RNF113AO15541 AC097359.3-201ENST00000603982 1210 ntBASIC19.21■□□□□ 0.67
RNF113AO15541 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF113AO15541 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC19.21■□□□□ 0.67
RNF113AO15541 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF113AO15541 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC19.21■□□□□ 0.67
RNF113AO15541 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC19.21■□□□□ 0.67
RNF113AO15541 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF113AO15541 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC19.21■□□□□ 0.67
RNF113AO15541 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC19.2■□□□□ 0.66
RNF113AO15541 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RNF113AO15541 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF113AO15541 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF113AO15541 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC19.2■□□□□ 0.66
RNF113AO15541 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RNF113AO15541 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF113AO15541 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
RNF113AO15541 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RNF113AO15541 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF113AO15541 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC19.2■□□□□ 0.66
RNF113AO15541 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF113AO15541 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF113AO15541 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC19.2■□□□□ 0.66
RNF113AO15541 RAD18-204ENST00000418463 563 ntTSL 4 BASIC19.2■□□□□ 0.66
RNF113AO15541 RAD18-205ENST00000421052 582 ntTSL 3 BASIC19.2■□□□□ 0.66
RNF113AO15541 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC19.2■□□□□ 0.66
RNF113AO15541 BCRP1-201ENST00000444246 691 ntBASIC19.2■□□□□ 0.66
RNF113AO15541 UGT1A2P-201ENST00000454886 866 ntBASIC19.2■□□□□ 0.66
RNF113AO15541 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC19.2■□□□□ 0.66
RNF113AO15541 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC19.2■□□□□ 0.66
RNF113AO15541 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC19.2■□□□□ 0.66
RNF113AO15541 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RNF113AO15541 HNRNPUP1-201ENST00000554987 333 ntBASIC19.2■□□□□ 0.66
RNF113AO15541 AC025048.3-201ENST00000590609 569 ntBASIC19.2■□□□□ 0.66
RNF113AO15541 AC005702.4-201ENST00000618393 416 ntBASIC19.2■□□□□ 0.66
RNF113AO15541 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC19.2■□□□□ 0.66
RNF113AO15541 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF113AO15541 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF113AO15541 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF113AO15541 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
RNF113AO15541 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms