Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC18.36■□□□□ 0.53
TMEM88BA6NKF7 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC18.36■□□□□ 0.53
TMEM88BA6NKF7 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC18.36■□□□□ 0.53
TMEM88BA6NKF7 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC18.36■□□□□ 0.53
TMEM88BA6NKF7 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC18.36■□□□□ 0.53
TMEM88BA6NKF7 CASP16P-204ENST00000635032 809 ntBASIC18.36■□□□□ 0.53
TMEM88BA6NKF7 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
TMEM88BA6NKF7 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM88BA6NKF7 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.36■□□□□ 0.53
TMEM88BA6NKF7 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TMEM88BA6NKF7 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.36■□□□□ 0.53
TMEM88BA6NKF7 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
TMEM88BA6NKF7 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
TMEM88BA6NKF7 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM88BA6NKF7 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.35■□□□□ 0.53
TMEM88BA6NKF7 AL645728.1-201ENST00000366221 2101 ntBASIC18.35■□□□□ 0.53
TMEM88BA6NKF7 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.35■□□□□ 0.53
TMEM88BA6NKF7 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM88BA6NKF7 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM88BA6NKF7 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM88BA6NKF7 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM88BA6NKF7 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
TMEM88BA6NKF7 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM88BA6NKF7 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM88BA6NKF7 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TMEM88BA6NKF7 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM88BA6NKF7 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
TMEM88BA6NKF7 ACTBP8-201ENST00000403258 1108 ntBASIC18.35■□□□□ 0.53
TMEM88BA6NKF7 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TMEM88BA6NKF7 AC245100.5-201ENST00000452108 331 ntBASIC18.35■□□□□ 0.53
TMEM88BA6NKF7 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC18.35■□□□□ 0.53
TMEM88BA6NKF7 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC18.35■□□□□ 0.53
TMEM88BA6NKF7 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC18.35■□□□□ 0.53
TMEM88BA6NKF7 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM88BA6NKF7 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC18.35■□□□□ 0.53
TMEM88BA6NKF7 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM88BA6NKF7 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC18.35■□□□□ 0.53
TMEM88BA6NKF7 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC18.35■□□□□ 0.53
TMEM88BA6NKF7 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC18.35■□□□□ 0.53
TMEM88BA6NKF7 WT1-AS_6.1-201ENST00000614919 121 ntBASIC18.35■□□□□ 0.53
TMEM88BA6NKF7 BX539320.1-201ENST00000623759 877 ntBASIC18.35■□□□□ 0.53
TMEM88BA6NKF7 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TMEM88BA6NKF7 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM88BA6NKF7 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM88BA6NKF7 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM88BA6NKF7 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM88BA6NKF7 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.35■□□□□ 0.53
TMEM88BA6NKF7 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
TMEM88BA6NKF7 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TMEM88BA6NKF7 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM88BA6NKF7 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
TMEM88BA6NKF7 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.35■□□□□ 0.53
TMEM88BA6NKF7 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM88BA6NKF7 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.34■□□□□ 0.53
TMEM88BA6NKF7 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM88BA6NKF7 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM88BA6NKF7 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TMEM88BA6NKF7 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM88BA6NKF7 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.34■□□□□ 0.53
TMEM88BA6NKF7 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM88BA6NKF7 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM88BA6NKF7 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM88BA6NKF7 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC18.34■□□□□ 0.53
TMEM88BA6NKF7 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM88BA6NKF7 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM88BA6NKF7 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM88BA6NKF7 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM88BA6NKF7 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC18.34■□□□□ 0.53
TMEM88BA6NKF7 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
TMEM88BA6NKF7 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC18.34■□□□□ 0.53
TMEM88BA6NKF7 AC136604.1-201ENST00000418535 575 ntBASIC18.34■□□□□ 0.53
TMEM88BA6NKF7 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM88BA6NKF7 AC006335.1-201ENST00000445200 547 ntBASIC18.34■□□□□ 0.53
TMEM88BA6NKF7 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC18.34■□□□□ 0.53
TMEM88BA6NKF7 CEP164P1-201ENST00000455142 418 ntBASIC18.34■□□□□ 0.53
TMEM88BA6NKF7 PHKG1P2-201ENST00000457537 863 ntBASIC18.34■□□□□ 0.53
TMEM88BA6NKF7 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM88BA6NKF7 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
TMEM88BA6NKF7 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM88BA6NKF7 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC18.34■□□□□ 0.53
TMEM88BA6NKF7 AC132192.2-201ENST00000596206 1147 ntBASIC18.34■□□□□ 0.53
TMEM88BA6NKF7 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM88BA6NKF7 AC148477.9-201ENST00000623974 539 ntBASIC18.34■□□□□ 0.53
TMEM88BA6NKF7 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM88BA6NKF7 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM88BA6NKF7 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.34■□□□□ 0.53
TMEM88BA6NKF7 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM88BA6NKF7 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TMEM88BA6NKF7 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.53
TMEM88BA6NKF7 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
TMEM88BA6NKF7 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TMEM88BA6NKF7 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TMEM88BA6NKF7 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM88BA6NKF7 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM88BA6NKF7 DPM3-202ENST00000368399 517 ntBASIC18.33■□□□□ 0.52
TMEM88BA6NKF7 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM88BA6NKF7 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC18.33■□□□□ 0.52
TMEM88BA6NKF7 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC18.33■□□□□ 0.52
TMEM88BA6NKF7 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
TMEM88BA6NKF7 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms