Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
PRAMEF25A6NGN4 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.11■□□□□ 0.01
PRAMEF25A6NGN4 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRAMEF25A6NGN4 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
PRAMEF25A6NGN4 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRAMEF25A6NGN4 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRAMEF25A6NGN4 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRAMEF25A6NGN4 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRAMEF25A6NGN4 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PRAMEF25A6NGN4 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRAMEF25A6NGN4 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.11■□□□□ 0.01
PRAMEF25A6NGN4 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.11■□□□□ 0.01
PRAMEF25A6NGN4 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
PRAMEF25A6NGN4 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRAMEF25A6NGN4 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRAMEF25A6NGN4 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRAMEF25A6NGN4 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
PRAMEF25A6NGN4 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
PRAMEF25A6NGN4 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRAMEF25A6NGN4 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.1■□□□□ 0.01
PRAMEF25A6NGN4 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRAMEF25A6NGN4 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.1■□□□□ 0.01
PRAMEF25A6NGN4 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
PRAMEF25A6NGN4 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRAMEF25A6NGN4 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.1■□□□□ 0.01
PRAMEF25A6NGN4 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRAMEF25A6NGN4 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRAMEF25A6NGN4 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
PRAMEF25A6NGN4 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
PRAMEF25A6NGN4 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRAMEF25A6NGN4 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.1■□□□□ 0.01
PRAMEF25A6NGN4 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRAMEF25A6NGN4 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRAMEF25A6NGN4 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PRAMEF25A6NGN4 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRAMEF25A6NGN4 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
PRAMEF25A6NGN4 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
PRAMEF25A6NGN4 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRAMEF25A6NGN4 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PRAMEF25A6NGN4 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.1■□□□□ 0.01
PRAMEF25A6NGN4 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
PRAMEF25A6NGN4 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.1■□□□□ 0.01
PRAMEF25A6NGN4 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.1■□□□□ 0.01
PRAMEF25A6NGN4 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
PRAMEF25A6NGN4 AC005237.2-201ENST00000434368 219 ntBASIC15.1■□□□□ 0.01
PRAMEF25A6NGN4 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PRAMEF25A6NGN4 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.1■□□□□ 0.01
PRAMEF25A6NGN4 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.1■□□□□ 0.01
PRAMEF25A6NGN4 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PRAMEF25A6NGN4 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
PRAMEF25A6NGN4 KRT8P23-201ENST00000560090 1207 ntBASIC15.1■□□□□ 0.01
PRAMEF25A6NGN4 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.1■□□□□ 0.01
PRAMEF25A6NGN4 AP001160.2-201ENST00000596071 487 ntBASIC15.1■□□□□ 0.01
PRAMEF25A6NGN4 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.1■□□□□ 0.01
PRAMEF25A6NGN4 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRAMEF25A6NGN4 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PRAMEF25A6NGN4 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.1■□□□□ 0.01
PRAMEF25A6NGN4 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.1■□□□□ 0.01
PRAMEF25A6NGN4 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRAMEF25A6NGN4 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRAMEF25A6NGN4 SSR4P1-203ENST00000599569 2260 ntBASIC15.1■□□□□ 0.01
PRAMEF25A6NGN4 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PRAMEF25A6NGN4 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRAMEF25A6NGN4 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PRAMEF25A6NGN4 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRAMEF25A6NGN4 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
PRAMEF25A6NGN4 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRAMEF25A6NGN4 AC136621.1-201ENST00000624017 2304 ntBASIC15.1■□□□□ 0.01
PRAMEF25A6NGN4 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.1■□□□□ 0.01
PRAMEF25A6NGN4 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.1■□□□□ 0.01
PRAMEF25A6NGN4 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRAMEF25A6NGN4 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
PRAMEF25A6NGN4 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRAMEF25A6NGN4 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.1■□□□□ 0.01
PRAMEF25A6NGN4 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
PRAMEF25A6NGN4 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRAMEF25A6NGN4 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
PRAMEF25A6NGN4 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.09■□□□□ 0.01
PRAMEF25A6NGN4 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
PRAMEF25A6NGN4 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRAMEF25A6NGN4 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
PRAMEF25A6NGN4 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.09■□□□□ 0.01
PRAMEF25A6NGN4 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
PRAMEF25A6NGN4 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
PRAMEF25A6NGN4 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRAMEF25A6NGN4 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PRAMEF25A6NGN4 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.09■□□□□ 0.01
PRAMEF25A6NGN4 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
PRAMEF25A6NGN4 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRAMEF25A6NGN4 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
PRAMEF25A6NGN4 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PRAMEF25A6NGN4 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
PRAMEF25A6NGN4 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
PRAMEF25A6NGN4 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRAMEF25A6NGN4 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRAMEF25A6NGN4 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRAMEF25A6NGN4 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.09■□□□□ 0.01
PRAMEF25A6NGN4 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
PRAMEF25A6NGN4 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PRAMEF25A6NGN4 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms