Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 AC068760.1-201ENST00000493579 1953 ntBASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 AC097359.2-201ENST00000604992 2389 ntBASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 MYCLP1-201ENST00000372451 1075 ntBASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 ID1-201ENST00000376105 1233 ntBASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 GRAMD4P2-201ENST00000423297 1097 ntBASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 AC008687.5-201ENST00000593746 558 ntBASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 DIAPH2-201ENST00000324765 9333 ntAPPRIS P4 TSL 1 (best) BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 USP47-202ENST00000339865 7775 ntTSL 2 BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC8.26□□□□□ -1.09
LINC01558Q9Y6Z2 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms