Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB6Q9Y5F9 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB6Q9Y5F9 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB6Q9Y5F9 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB6Q9Y5F9 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB6Q9Y5F9 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB6Q9Y5F9 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB6Q9Y5F9 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB6Q9Y5F9 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB6Q9Y5F9 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB6Q9Y5F9 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.3■□□□□ 0.04
PCDHGB6Q9Y5F9 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.3■□□□□ 0.04
PCDHGB6Q9Y5F9 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.3■□□□□ 0.04
PCDHGB6Q9Y5F9 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.3■□□□□ 0.04
PCDHGB6Q9Y5F9 SPDYE7P-202ENST00000420373 878 ntBASIC15.3■□□□□ 0.04
PCDHGB6Q9Y5F9 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB6Q9Y5F9 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.3■□□□□ 0.04
PCDHGB6Q9Y5F9 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.3■□□□□ 0.04
PCDHGB6Q9Y5F9 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.3■□□□□ 0.04
PCDHGB6Q9Y5F9 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.3■□□□□ 0.04
PCDHGB6Q9Y5F9 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.3■□□□□ 0.04
PCDHGB6Q9Y5F9 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PCDHGB6Q9Y5F9 RNA5SP421-201ENST00000516864 134 ntBASIC15.3■□□□□ 0.04
PCDHGB6Q9Y5F9 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.3■□□□□ 0.04
PCDHGB6Q9Y5F9 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.3■□□□□ 0.04
PCDHGB6Q9Y5F9 AC006538.1-201ENST00000567905 1585 ntBASIC15.3■□□□□ 0.04
PCDHGB6Q9Y5F9 AC051619.7-201ENST00000568314 623 ntBASIC15.3■□□□□ 0.04
PCDHGB6Q9Y5F9 MIR4492-201ENST00000581627 80 ntBASIC15.3■□□□□ 0.04
PCDHGB6Q9Y5F9 AC021097.1-201ENST00000607902 574 ntBASIC15.3■□□□□ 0.04
PCDHGB6Q9Y5F9 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
PCDHGB6Q9Y5F9 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB6Q9Y5F9 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
PCDHGB6Q9Y5F9 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB6Q9Y5F9 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB6Q9Y5F9 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB6Q9Y5F9 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.3■□□□□ 0.04
PCDHGB6Q9Y5F9 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB6Q9Y5F9 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
PCDHGB6Q9Y5F9 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
PCDHGB6Q9Y5F9 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB6Q9Y5F9 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB6Q9Y5F9 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PCDHGB6Q9Y5F9 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB6Q9Y5F9 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB6Q9Y5F9 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDHGB6Q9Y5F9 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
PCDHGB6Q9Y5F9 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PCDHGB6Q9Y5F9 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDHGB6Q9Y5F9 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB6Q9Y5F9 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PCDHGB6Q9Y5F9 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB6Q9Y5F9 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB6Q9Y5F9 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB6Q9Y5F9 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDHGB6Q9Y5F9 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
PCDHGB6Q9Y5F9 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.29■□□□□ 0.04
PCDHGB6Q9Y5F9 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB6Q9Y5F9 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB6Q9Y5F9 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB6Q9Y5F9 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDHGB6Q9Y5F9 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB6Q9Y5F9 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.29■□□□□ 0.04
PCDHGB6Q9Y5F9 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB6Q9Y5F9 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB6Q9Y5F9 AC068587.6-202ENST00000641839 5619 ntBASIC15.29■□□□□ 0.04
PCDHGB6Q9Y5F9 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB6Q9Y5F9 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
PCDHGB6Q9Y5F9 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB6Q9Y5F9 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.29■□□□□ 0.04
PCDHGB6Q9Y5F9 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB6Q9Y5F9 MIR346-201ENST00000362234 95 ntBASIC15.29■□□□□ 0.04
PCDHGB6Q9Y5F9 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
PCDHGB6Q9Y5F9 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB6Q9Y5F9 AL035633.1-201ENST00000406139 838 ntBASIC15.29■□□□□ 0.04
PCDHGB6Q9Y5F9 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.29■□□□□ 0.04
PCDHGB6Q9Y5F9 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.29■□□□□ 0.04
PCDHGB6Q9Y5F9 FAM58DP-201ENST00000428076 619 ntBASIC15.29■□□□□ 0.04
PCDHGB6Q9Y5F9 GPS2P2-201ENST00000430745 888 ntBASIC15.29■□□□□ 0.04
PCDHGB6Q9Y5F9 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDHGB6Q9Y5F9 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB6Q9Y5F9 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB6Q9Y5F9 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.29■□□□□ 0.04
PCDHGB6Q9Y5F9 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.29■□□□□ 0.04
PCDHGB6Q9Y5F9 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.29■□□□□ 0.04
PCDHGB6Q9Y5F9 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDHGB6Q9Y5F9 Z92544.3-201ENST00000624747 417 ntBASIC15.29■□□□□ 0.04
PCDHGB6Q9Y5F9 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.29■□□□□ 0.04
PCDHGB6Q9Y5F9 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB6Q9Y5F9 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PCDHGB6Q9Y5F9 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PCDHGB6Q9Y5F9 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB6Q9Y5F9 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PCDHGB6Q9Y5F9 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB6Q9Y5F9 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.29■□□□□ 0.04
PCDHGB6Q9Y5F9 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB6Q9Y5F9 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB6Q9Y5F9 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB6Q9Y5F9 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB6Q9Y5F9 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB6Q9Y5F9 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms