Protein–RNA interactions for Protein: Q9Y577

TRIM17, E3 ubiquitin-protein ligase TRIM17, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17Q9Y577 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
TRIM17Q9Y577 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM17Q9Y577 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.01■□□□□ 0.47
TRIM17Q9Y577 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM17Q9Y577 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM17Q9Y577 BICD1-207ENST00000551848 1962 ntBASIC18.01■□□□□ 0.47
TRIM17Q9Y577 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM17Q9Y577 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM17Q9Y577 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM17Q9Y577 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM17Q9Y577 AL691432.1-201ENST00000596308 1422 ntBASIC18.01■□□□□ 0.47
TRIM17Q9Y577 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
TRIM17Q9Y577 AC135050.7-201ENST00000624508 2218 ntBASIC18.01■□□□□ 0.47
TRIM17Q9Y577 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM17Q9Y577 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM17Q9Y577 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
TRIM17Q9Y577 MIR769-201ENST00000390225 118 ntBASIC18.01■□□□□ 0.47
TRIM17Q9Y577 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM17Q9Y577 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM17Q9Y577 USP40-206ENST00000443711 628 ntTSL 2 BASIC18.01■□□□□ 0.47
TRIM17Q9Y577 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM17Q9Y577 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC18.01■□□□□ 0.47
TRIM17Q9Y577 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC18.01■□□□□ 0.47
TRIM17Q9Y577 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC18.01■□□□□ 0.47
TRIM17Q9Y577 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC18.01■□□□□ 0.47
TRIM17Q9Y577 IFT20-206ENST00000578122 834 ntTSL 2 BASIC18.01■□□□□ 0.47
TRIM17Q9Y577 IFT20-208ENST00000578985 831 ntTSL 3 BASIC18.01■□□□□ 0.47
TRIM17Q9Y577 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM17Q9Y577 CYGB-203ENST00000589145 788 ntTSL 3 BASIC18.01■□□□□ 0.47
TRIM17Q9Y577 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM17Q9Y577 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM17Q9Y577 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM17Q9Y577 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
TRIM17Q9Y577 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM17Q9Y577 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM17Q9Y577 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC18.01■□□□□ 0.47
TRIM17Q9Y577 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM17Q9Y577 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM17Q9Y577 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
TRIM17Q9Y577 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
TRIM17Q9Y577 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM17Q9Y577 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.01■□□□□ 0.47
TRIM17Q9Y577 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM17Q9Y577 GGT4P-201ENST00000623672 1708 ntBASIC18.01■□□□□ 0.47
TRIM17Q9Y577 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
TRIM17Q9Y577 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM17Q9Y577 AC090340.1-201ENST00000620778 4980 ntBASIC18■□□□□ 0.47
TRIM17Q9Y577 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM17Q9Y577 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM17Q9Y577 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRIM17Q9Y577 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18■□□□□ 0.47
TRIM17Q9Y577 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM17Q9Y577 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM17Q9Y577 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
TRIM17Q9Y577 EEF1DP4-201ENST00000446006 880 ntBASIC18■□□□□ 0.47
TRIM17Q9Y577 ATP6V0CP2-201ENST00000469409 207 ntBASIC18■□□□□ 0.47
TRIM17Q9Y577 AC008267.1-201ENST00000474858 1069 ntBASIC18■□□□□ 0.47
TRIM17Q9Y577 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC18■□□□□ 0.47
TRIM17Q9Y577 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC18■□□□□ 0.47
TRIM17Q9Y577 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC18■□□□□ 0.47
TRIM17Q9Y577 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC18■□□□□ 0.47
TRIM17Q9Y577 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC18■□□□□ 0.47
TRIM17Q9Y577 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC18■□□□□ 0.47
TRIM17Q9Y577 AP001505.2-201ENST00000616815 443 ntBASIC18■□□□□ 0.47
TRIM17Q9Y577 AL353726.2-201ENST00000623259 884 ntBASIC18■□□□□ 0.47
TRIM17Q9Y577 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC18■□□□□ 0.47
TRIM17Q9Y577 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRIM17Q9Y577 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM17Q9Y577 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM17Q9Y577 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC18■□□□□ 0.47
TRIM17Q9Y577 RHBDF1P1-201ENST00000427504 1941 ntBASIC18■□□□□ 0.47
TRIM17Q9Y577 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM17Q9Y577 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM17Q9Y577 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.99■□□□□ 0.47
TRIM17Q9Y577 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM17Q9Y577 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM17Q9Y577 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM17Q9Y577 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM17Q9Y577 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM17Q9Y577 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM17Q9Y577 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM17Q9Y577 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.99■□□□□ 0.47
TRIM17Q9Y577 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM17Q9Y577 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM17Q9Y577 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.99■□□□□ 0.47
TRIM17Q9Y577 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC17.99■□□□□ 0.47
TRIM17Q9Y577 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC17.99■□□□□ 0.47
TRIM17Q9Y577 AP001582.1-201ENST00000525856 295 ntBASIC17.99■□□□□ 0.47
TRIM17Q9Y577 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM17Q9Y577 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM17Q9Y577 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM17Q9Y577 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.99■□□□□ 0.47
TRIM17Q9Y577 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM17Q9Y577 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM17Q9Y577 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
TRIM17Q9Y577 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM17Q9Y577 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM17Q9Y577 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM17Q9Y577 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.98■□□□□ 0.47
TRIM17Q9Y577 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms