Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 KRT8P37-201ENST00000451609 1420 ntBASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC11□□□□□ -0.65
LINC00588Q9Y4M8 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC11□□□□□ -0.65
LINC00588Q9Y4M8 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC11□□□□□ -0.65
LINC00588Q9Y4M8 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC00588Q9Y4M8 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC00588Q9Y4M8 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
LINC00588Q9Y4M8 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
LINC00588Q9Y4M8 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC11□□□□□ -0.65
LINC00588Q9Y4M8 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC00588Q9Y4M8 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
LINC00588Q9Y4M8 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC11□□□□□ -0.65
LINC00588Q9Y4M8 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC11□□□□□ -0.65
LINC00588Q9Y4M8 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC11□□□□□ -0.65
LINC00588Q9Y4M8 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC00588Q9Y4M8 COPE-202ENST00000349893 948 ntTSL 2 BASIC11□□□□□ -0.65
LINC00588Q9Y4M8 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC11□□□□□ -0.65
LINC00588Q9Y4M8 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC11□□□□□ -0.65
LINC00588Q9Y4M8 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC11□□□□□ -0.65
LINC00588Q9Y4M8 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC11□□□□□ -0.65
LINC00588Q9Y4M8 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC11□□□□□ -0.65
LINC00588Q9Y4M8 OSM-203ENST00000403463 464 ntTSL 3 BASIC11□□□□□ -0.65
LINC00588Q9Y4M8 HAUS4P1-201ENST00000406739 1145 ntBASIC11□□□□□ -0.65
LINC00588Q9Y4M8 RAD18-204ENST00000418463 563 ntTSL 4 BASIC11□□□□□ -0.65
LINC00588Q9Y4M8 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC00588Q9Y4M8 RAD18-205ENST00000421052 582 ntTSL 3 BASIC11□□□□□ -0.65
LINC00588Q9Y4M8 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC11□□□□□ -0.65
LINC00588Q9Y4M8 HIST3H2BA-201ENST00000436555 524 ntBASIC11□□□□□ -0.65
LINC00588Q9Y4M8 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC11□□□□□ -0.65
LINC00588Q9Y4M8 SPDYE18-201ENST00000510091 1050 ntBASIC11□□□□□ -0.65
LINC00588Q9Y4M8 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC11□□□□□ -0.65
LINC00588Q9Y4M8 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC11□□□□□ -0.65
LINC00588Q9Y4M8 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
LINC00588Q9Y4M8 SUOX-214ENST00000551841 906 ntTSL 3 BASIC11□□□□□ -0.65
LINC00588Q9Y4M8 COQ6-210ENST00000554920 649 ntTSL 3 BASIC11□□□□□ -0.65
LINC00588Q9Y4M8 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC11□□□□□ -0.65
LINC00588Q9Y4M8 SPDYE22P-201ENST00000582158 798 ntBASIC11□□□□□ -0.65
LINC00588Q9Y4M8 5S_rRNA.22-201ENST00000614916 106 ntBASIC11□□□□□ -0.65
LINC00588Q9Y4M8 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC00588Q9Y4M8 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC11□□□□□ -0.65
LINC00588Q9Y4M8 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC00588Q9Y4M8 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC00588Q9Y4M8 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC00588Q9Y4M8 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC11□□□□□ -0.65
LINC00588Q9Y4M8 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC11□□□□□ -0.65
LINC00588Q9Y4M8 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC00588Q9Y4M8 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC11□□□□□ -0.65
LINC00588Q9Y4M8 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC00588Q9Y4M8 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC11□□□□□ -0.65
LINC00588Q9Y4M8 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
LINC00588Q9Y4M8 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
LINC00588Q9Y4M8 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC11□□□□□ -0.65
LINC00588Q9Y4M8 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC11□□□□□ -0.65
LINC00588Q9Y4M8 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC11□□□□□ -0.65
LINC00588Q9Y4M8 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
LINC00588Q9Y4M8 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 C8orf49-201ENST00000525043 1968 ntBASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 BNIP3P1-202ENST00000550043 1585 ntBASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms